Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC52A3Q9NQ40 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC52A3Q9NQ40 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC52A3Q9NQ40 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC52A3Q9NQ40 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC52A3Q9NQ40 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
SLC52A3Q9NQ40 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SLC52A3Q9NQ40 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC52A3Q9NQ40 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC52A3Q9NQ40 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC52A3Q9NQ40 AL162430.1-201ENST00000480705 870 ntBASIC18.36■□□□□ 0.53
SLC52A3Q9NQ40 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.36■□□□□ 0.53
SLC52A3Q9NQ40 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC52A3Q9NQ40 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
SLC52A3Q9NQ40 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC52A3Q9NQ40 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC52A3Q9NQ40 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC52A3Q9NQ40 AL050303.2-201ENST00000619798 666 ntBASIC18.36■□□□□ 0.53
SLC52A3Q9NQ40 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.36■□□□□ 0.53
SLC52A3Q9NQ40 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
SLC52A3Q9NQ40 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC52A3Q9NQ40 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC52A3Q9NQ40 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SLC52A3Q9NQ40 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC52A3Q9NQ40 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC52A3Q9NQ40 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.35■□□□□ 0.53
SLC52A3Q9NQ40 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SLC52A3Q9NQ40 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC52A3Q9NQ40 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC52A3Q9NQ40 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC52A3Q9NQ40 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SLC52A3Q9NQ40 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC52A3Q9NQ40 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC52A3Q9NQ40 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SLC52A3Q9NQ40 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.35■□□□□ 0.53
SLC52A3Q9NQ40 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
SLC52A3Q9NQ40 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC52A3Q9NQ40 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC52A3Q9NQ40 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC52A3Q9NQ40 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SLC52A3Q9NQ40 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SLC52A3Q9NQ40 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC52A3Q9NQ40 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC52A3Q9NQ40 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC52A3Q9NQ40 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SLC52A3Q9NQ40 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC52A3Q9NQ40 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC52A3Q9NQ40 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC52A3Q9NQ40 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.34■□□□□ 0.53
SLC52A3Q9NQ40 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC52A3Q9NQ40 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.34■□□□□ 0.53
SLC52A3Q9NQ40 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC52A3Q9NQ40 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC52A3Q9NQ40 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC52A3Q9NQ40 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC52A3Q9NQ40 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SLC52A3Q9NQ40 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SLC52A3Q9NQ40 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.33■□□□□ 0.53
SLC52A3Q9NQ40 KRT8P8-201ENST00000434750 1448 ntBASIC18.33■□□□□ 0.53
SLC52A3Q9NQ40 AL354751.1-201ENST00000412768 1863 ntBASIC18.33■□□□□ 0.53
SLC52A3Q9NQ40 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SLC52A3Q9NQ40 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC52A3Q9NQ40 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC52A3Q9NQ40 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.33■□□□□ 0.53
SLC52A3Q9NQ40 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.33■□□□□ 0.53
SLC52A3Q9NQ40 FEM1AP3-201ENST00000403722 1741 ntBASIC18.33■□□□□ 0.52
SLC52A3Q9NQ40 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC52A3Q9NQ40 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SLC52A3Q9NQ40 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC52A3Q9NQ40 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC52A3Q9NQ40 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC52A3Q9NQ40 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
SLC52A3Q9NQ40 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SLC52A3Q9NQ40 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC52A3Q9NQ40 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC52A3Q9NQ40 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SLC52A3Q9NQ40 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.33■□□□□ 0.52
SLC52A3Q9NQ40 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SLC52A3Q9NQ40 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC52A3Q9NQ40 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC52A3Q9NQ40 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
SLC52A3Q9NQ40 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC52A3Q9NQ40 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SLC52A3Q9NQ40 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms