Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMG20AQ9NP66 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.58■□□□□ 0.4
HMG20AQ9NP66 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMG20AQ9NP66 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMG20AQ9NP66 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.58■□□□□ 0.4
HMG20AQ9NP66 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.58■□□□□ 0.4
HMG20AQ9NP66 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HMG20AQ9NP66 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
HMG20AQ9NP66 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
HMG20AQ9NP66 WIZP1-201ENST00000531444 2299 ntBASIC17.58■□□□□ 0.4
HMG20AQ9NP66 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMG20AQ9NP66 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMG20AQ9NP66 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.57■□□□□ 0.4
HMG20AQ9NP66 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HMG20AQ9NP66 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.57■□□□□ 0.4
HMG20AQ9NP66 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HMG20AQ9NP66 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HMG20AQ9NP66 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMG20AQ9NP66 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.57■□□□□ 0.4
HMG20AQ9NP66 AC138907.5-202ENST00000569484 235 ntBASIC17.57■□□□□ 0.4
HMG20AQ9NP66 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.57■□□□□ 0.4
HMG20AQ9NP66 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HMG20AQ9NP66 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMG20AQ9NP66 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMG20AQ9NP66 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMG20AQ9NP66 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HMG20AQ9NP66 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HMG20AQ9NP66 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMG20AQ9NP66 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HMG20AQ9NP66 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HMG20AQ9NP66 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMG20AQ9NP66 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
HMG20AQ9NP66 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HMG20AQ9NP66 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.56■□□□□ 0.4
HMG20AQ9NP66 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
HMG20AQ9NP66 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HMG20AQ9NP66 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.56■□□□□ 0.4
HMG20AQ9NP66 AC123595.1-201ENST00000440769 1046 ntBASIC17.56■□□□□ 0.4
HMG20AQ9NP66 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.56■□□□□ 0.4
HMG20AQ9NP66 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.56■□□□□ 0.4
HMG20AQ9NP66 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HMG20AQ9NP66 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
HMG20AQ9NP66 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMG20AQ9NP66 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HMG20AQ9NP66 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMG20AQ9NP66 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMG20AQ9NP66 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMG20AQ9NP66 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HMG20AQ9NP66 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.56■□□□□ 0.4
HMG20AQ9NP66 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
HMG20AQ9NP66 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.56■□□□□ 0.4
HMG20AQ9NP66 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
HMG20AQ9NP66 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HMG20AQ9NP66 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMG20AQ9NP66 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMG20AQ9NP66 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMG20AQ9NP66 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HMG20AQ9NP66 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMG20AQ9NP66 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMG20AQ9NP66 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.55■□□□□ 0.4
HMG20AQ9NP66 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.55■□□□□ 0.4
HMG20AQ9NP66 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HMG20AQ9NP66 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMG20AQ9NP66 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMG20AQ9NP66 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HMG20AQ9NP66 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMG20AQ9NP66 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HMG20AQ9NP66 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HMG20AQ9NP66 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMG20AQ9NP66 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
HMG20AQ9NP66 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HMG20AQ9NP66 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.55■□□□□ 0.4
HMG20AQ9NP66 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMG20AQ9NP66 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMG20AQ9NP66 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMG20AQ9NP66 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HMG20AQ9NP66 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMG20AQ9NP66 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMG20AQ9NP66 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.54■□□□□ 0.4
HMG20AQ9NP66 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMG20AQ9NP66 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMG20AQ9NP66 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMG20AQ9NP66 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMG20AQ9NP66 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMG20AQ9NP66 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
HMG20AQ9NP66 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMG20AQ9NP66 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.54■□□□□ 0.4
HMG20AQ9NP66 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.54■□□□□ 0.4
HMG20AQ9NP66 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMG20AQ9NP66 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.54■□□□□ 0.4
HMG20AQ9NP66 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMG20AQ9NP66 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMG20AQ9NP66 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
HMG20AQ9NP66 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMG20AQ9NP66 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMG20AQ9NP66 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HMG20AQ9NP66 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.54■□□□□ 0.4
HMG20AQ9NP66 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.54■□□□□ 0.4
HMG20AQ9NP66 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.54■□□□□ 0.4
HMG20AQ9NP66 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms