Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.53■□□□□ 0.56
BRF2Q9HAW0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 NBPF21P-201ENST00000425093 1451 ntBASIC18.52■□□□□ 0.56
BRF2Q9HAW0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 SDHAP1-207ENST00000440850 2000 ntBASIC18.52■□□□□ 0.56
BRF2Q9HAW0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
BRF2Q9HAW0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
BRF2Q9HAW0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
BRF2Q9HAW0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.52■□□□□ 0.55
BRF2Q9HAW0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 MTDHP1-201ENST00000605323 784 ntBASIC18.51■□□□□ 0.55
BRF2Q9HAW0 AC069544.1-201ENST00000609399 999 ntBASIC18.51■□□□□ 0.55
BRF2Q9HAW0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms