Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.53■□□□□ 0.56
BRF2Q9HAW0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRF2Q9HAW0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 NBPF21P-201ENST00000425093 1451 ntBASIC18.52■□□□□ 0.56
BRF2Q9HAW0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 SDHAP1-207ENST00000440850 2000 ntBASIC18.52■□□□□ 0.56
BRF2Q9HAW0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.52■□□□□ 0.56
BRF2Q9HAW0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
BRF2Q9HAW0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
BRF2Q9HAW0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
BRF2Q9HAW0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.52■□□□□ 0.55
BRF2Q9HAW0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 MTDHP1-201ENST00000605323 784 ntBASIC18.51■□□□□ 0.55
BRF2Q9HAW0 AC069544.1-201ENST00000609399 999 ntBASIC18.51■□□□□ 0.55
BRF2Q9HAW0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.51■□□□□ 0.55
BRF2Q9HAW0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BRF2Q9HAW0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms