Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
MAP1LC3AQ9H492 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC14.15□□□□□ -0.14
MAP1LC3AQ9H492 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
MAP1LC3AQ9H492 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MAP1LC3AQ9H492 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MAP1LC3AQ9H492 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MAP1LC3AQ9H492 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
MAP1LC3AQ9H492 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MAP1LC3AQ9H492 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MAP1LC3AQ9H492 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MAP1LC3AQ9H492 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.15□□□□□ -0.14
MAP1LC3AQ9H492 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MAP1LC3AQ9H492 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MAP1LC3AQ9H492 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 NOC2LP2-201ENST00000407594 1944 ntBASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 AC138907.5-202ENST00000569484 235 ntBASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 SRR-208ENST00000576848 588 ntTSL 4 BASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 PKD1P5-201ENST00000532415 10291 ntBASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MAP1LC3AQ9H492 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 NOC2LP1-202ENST00000452600 2235 ntBASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 AL358852.1-201ENST00000623174 1268 ntBASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 AP000997.3-201ENST00000623333 2250 ntBASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
MAP1LC3AQ9H492 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
MAP1LC3AQ9H492 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MAP1LC3AQ9H492 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
MAP1LC3AQ9H492 KRT87P-202ENST00000534226 1464 ntBASIC14.12□□□□□ -0.15
MAP1LC3AQ9H492 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MAP1LC3AQ9H492 AL354751.1-201ENST00000412768 1863 ntBASIC14.12□□□□□ -0.15
MAP1LC3AQ9H492 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
MAP1LC3AQ9H492 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MAP1LC3AQ9H492 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MAP1LC3AQ9H492 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
MAP1LC3AQ9H492 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MAP1LC3AQ9H492 Z98044.1-201ENST00000632503 1764 ntBASIC14.12□□□□□ -0.15
MAP1LC3AQ9H492 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
MAP1LC3AQ9H492 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MAP1LC3AQ9H492 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MAP1LC3AQ9H492 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
MAP1LC3AQ9H492 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MAP1LC3AQ9H492 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MAP1LC3AQ9H492 GRAMD4P7-201ENST00000578182 1232 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms