Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
PTPN23Q9H3S7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC29.28■■■□□ 2.28
PTPN23Q9H3S7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PTPN23Q9H3S7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC29.27■■■□□ 2.28
PTPN23Q9H3S7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC29.27■■■□□ 2.28
PTPN23Q9H3S7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
PTPN23Q9H3S7 TSPY23P-201ENST00000440136 739 ntBASIC29.27■■■□□ 2.28
PTPN23Q9H3S7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC29.27■■■□□ 2.28
PTPN23Q9H3S7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC29.27■■■□□ 2.28
PTPN23Q9H3S7 AL353719.1-201ENST00000566847 864 ntBASIC29.27■■■□□ 2.28
PTPN23Q9H3S7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
PTPN23Q9H3S7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
PTPN23Q9H3S7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
PTPN23Q9H3S7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC29.27■■■□□ 2.28
PTPN23Q9H3S7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
PTPN23Q9H3S7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC29.27■■■□□ 2.28
PTPN23Q9H3S7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
PTPN23Q9H3S7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC29.27■■■□□ 2.28
PTPN23Q9H3S7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
PTPN23Q9H3S7 ATP5G1P1-201ENST00000448724 379 ntBASIC29.27■■■□□ 2.28
PTPN23Q9H3S7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
PTPN23Q9H3S7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
PTPN23Q9H3S7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC29.26■■■□□ 2.28
PTPN23Q9H3S7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC29.26■■■□□ 2.28
PTPN23Q9H3S7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.28
PTPN23Q9H3S7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC29.26■■■□□ 2.28
PTPN23Q9H3S7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.28
PTPN23Q9H3S7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC29.26■■■□□ 2.27
PTPN23Q9H3S7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PTPN23Q9H3S7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PTPN23Q9H3S7 AC112907.3-201ENST00000577781 2400 ntBASIC29.26■■■□□ 2.27
PTPN23Q9H3S7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC29.26■■■□□ 2.27
PTPN23Q9H3S7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
PTPN23Q9H3S7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
PTPN23Q9H3S7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
PTPN23Q9H3S7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
PTPN23Q9H3S7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
PTPN23Q9H3S7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
PTPN23Q9H3S7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PTPN23Q9H3S7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC29.26■■■□□ 2.27
PTPN23Q9H3S7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PTPN23Q9H3S7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC29.26■■■□□ 2.27
PTPN23Q9H3S7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PTPN23Q9H3S7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PTPN23Q9H3S7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
PTPN23Q9H3S7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PTPN23Q9H3S7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PTPN23Q9H3S7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
PTPN23Q9H3S7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC29.25■■■□□ 2.27
PTPN23Q9H3S7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PTPN23Q9H3S7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC29.25■■■□□ 2.27
PTPN23Q9H3S7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC29.25■■■□□ 2.27
PTPN23Q9H3S7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC29.25■■■□□ 2.27
PTPN23Q9H3S7 NTF6B-201ENST00000591913 560 ntBASIC29.25■■■□□ 2.27
PTPN23Q9H3S7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
PTPN23Q9H3S7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC29.25■■■□□ 2.27
PTPN23Q9H3S7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC29.25■■■□□ 2.27
PTPN23Q9H3S7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
PTPN23Q9H3S7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC29.24■■■□□ 2.27
PTPN23Q9H3S7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
PTPN23Q9H3S7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
PTPN23Q9H3S7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
PTPN23Q9H3S7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC29.24■■■□□ 2.27
PTPN23Q9H3S7 YBX1P2-201ENST00000489612 999 ntBASIC29.24■■■□□ 2.27
PTPN23Q9H3S7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
PTPN23Q9H3S7 AC063952.2-201ENST00000498792 1227 ntBASIC29.24■■■□□ 2.27
PTPN23Q9H3S7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC29.24■■■□□ 2.27
PTPN23Q9H3S7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC29.24■■■□□ 2.27
PTPN23Q9H3S7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC29.24■■■□□ 2.27
PTPN23Q9H3S7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC29.24■■■□□ 2.27
PTPN23Q9H3S7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
PTPN23Q9H3S7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
PTPN23Q9H3S7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
PTPN23Q9H3S7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC29.23■■■□□ 2.27
PTPN23Q9H3S7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC29.23■■■□□ 2.27
PTPN23Q9H3S7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC29.23■■■□□ 2.27
PTPN23Q9H3S7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
PTPN23Q9H3S7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC29.23■■■□□ 2.27
PTPN23Q9H3S7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC29.23■■■□□ 2.27
PTPN23Q9H3S7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
PTPN23Q9H3S7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
PTPN23Q9H3S7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC29.23■■■□□ 2.27
PTPN23Q9H3S7 ANKRD20A18P-201ENST00000359341 492 ntBASIC29.23■■■□□ 2.27
PTPN23Q9H3S7 AK4P3-201ENST00000418260 669 ntBASIC29.23■■■□□ 2.27
PTPN23Q9H3S7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC29.23■■■□□ 2.27
PTPN23Q9H3S7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC29.23■■■□□ 2.27
PTPN23Q9H3S7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PTPN23Q9H3S7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC29.22■■■□□ 2.27
PTPN23Q9H3S7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC29.22■■■□□ 2.27
PTPN23Q9H3S7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC29.22■■■□□ 2.27
PTPN23Q9H3S7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC29.22■■■□□ 2.27
PTPN23Q9H3S7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
PTPN23Q9H3S7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC29.22■■■□□ 2.27
PTPN23Q9H3S7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PTPN23Q9H3S7 TBC1D3P2-202ENST00000577902 1649 ntBASIC29.22■■■□□ 2.27
PTPN23Q9H3S7 SDHAP1-207ENST00000440850 2000 ntBASIC29.22■■■□□ 2.27
PTPN23Q9H3S7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
PTPN23Q9H3S7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
PTPN23Q9H3S7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
PTPN23Q9H3S7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC29.21■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms