Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 AC233702.5-201ENST00000584107 538 ntBASIC17.95■□□□□ 0.46
UBQLN3Q9H347 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 TFP1-202ENST00000475455 1573 ntBASIC17.95■□□□□ 0.46
UBQLN3Q9H347 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
UBQLN3Q9H347 AC018553.1-201ENST00000616682 1458 ntBASIC17.95■□□□□ 0.46
UBQLN3Q9H347 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBQLN3Q9H347 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
UBQLN3Q9H347 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
UBQLN3Q9H347 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.93■□□□□ 0.46
UBQLN3Q9H347 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.93■□□□□ 0.46
UBQLN3Q9H347 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBQLN3Q9H347 AL135905.2-201ENST00000584934 1404 ntBASIC17.93■□□□□ 0.46
UBQLN3Q9H347 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBQLN3Q9H347 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
UBQLN3Q9H347 RPS2P55-201ENST00000397318 883 ntBASIC17.93■□□□□ 0.46
UBQLN3Q9H347 AL596275.1-201ENST00000423464 877 ntBASIC17.93■□□□□ 0.46
UBQLN3Q9H347 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
UBQLN3Q9H347 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.93■□□□□ 0.46
UBQLN3Q9H347 AC107956.1-201ENST00000494359 873 ntBASIC17.93■□□□□ 0.46
UBQLN3Q9H347 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UBQLN3Q9H347 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.93■□□□□ 0.46
UBQLN3Q9H347 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
UBQLN3Q9H347 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBQLN3Q9H347 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UBQLN3Q9H347 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.93■□□□□ 0.46
UBQLN3Q9H347 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.93■□□□□ 0.46
UBQLN3Q9H347 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UBQLN3Q9H347 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.93■□□□□ 0.46
UBQLN3Q9H347 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBQLN3Q9H347 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
UBQLN3Q9H347 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.93■□□□□ 0.46
UBQLN3Q9H347 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UBQLN3Q9H347 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 Z82202.1-201ENST00000623446 1880 ntBASIC17.92■□□□□ 0.46
UBQLN3Q9H347 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBQLN3Q9H347 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms