Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.48■□□□□ 0.87
LHX5Q9H2C1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.48■□□□□ 0.87
LHX5Q9H2C1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LHX5Q9H2C1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.48■□□□□ 0.87
LHX5Q9H2C1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.48■□□□□ 0.87
LHX5Q9H2C1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.48■□□□□ 0.87
LHX5Q9H2C1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LHX5Q9H2C1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LHX5Q9H2C1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LHX5Q9H2C1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.48■□□□□ 0.87
LHX5Q9H2C1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LHX5Q9H2C1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
LHX5Q9H2C1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.47■□□□□ 0.87
LHX5Q9H2C1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.47■□□□□ 0.87
LHX5Q9H2C1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
LHX5Q9H2C1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
LHX5Q9H2C1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.47■□□□□ 0.87
LHX5Q9H2C1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.47■□□□□ 0.87
LHX5Q9H2C1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.47■□□□□ 0.87
LHX5Q9H2C1 SDHAP1-207ENST00000440850 2000 ntBASIC20.47■□□□□ 0.87
LHX5Q9H2C1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LHX5Q9H2C1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.47■□□□□ 0.87
LHX5Q9H2C1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LHX5Q9H2C1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.47■□□□□ 0.87
LHX5Q9H2C1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
LHX5Q9H2C1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LHX5Q9H2C1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.46■□□□□ 0.87
LHX5Q9H2C1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
LHX5Q9H2C1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.46■□□□□ 0.87
LHX5Q9H2C1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LHX5Q9H2C1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.46■□□□□ 0.87
LHX5Q9H2C1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.46■□□□□ 0.87
LHX5Q9H2C1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
LHX5Q9H2C1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.46■□□□□ 0.87
LHX5Q9H2C1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.46■□□□□ 0.87
LHX5Q9H2C1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.46■□□□□ 0.87
LHX5Q9H2C1 AL353708.3-201ENST00000610272 989 ntBASIC20.46■□□□□ 0.87
LHX5Q9H2C1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.46■□□□□ 0.87
LHX5Q9H2C1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.46■□□□□ 0.87
LHX5Q9H2C1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LHX5Q9H2C1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
LHX5Q9H2C1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LHX5Q9H2C1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
LHX5Q9H2C1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.46■□□□□ 0.87
LHX5Q9H2C1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LHX5Q9H2C1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LHX5Q9H2C1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LHX5Q9H2C1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
LHX5Q9H2C1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.45■□□□□ 0.86
LHX5Q9H2C1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LHX5Q9H2C1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.45■□□□□ 0.86
LHX5Q9H2C1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LHX5Q9H2C1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LHX5Q9H2C1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
LHX5Q9H2C1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.45■□□□□ 0.86
LHX5Q9H2C1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LHX5Q9H2C1 AL160286.2-201ENST00000567150 934 ntBASIC20.45■□□□□ 0.86
LHX5Q9H2C1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
LHX5Q9H2C1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.45■□□□□ 0.86
LHX5Q9H2C1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
LHX5Q9H2C1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LHX5Q9H2C1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LHX5Q9H2C1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.45■□□□□ 0.86
LHX5Q9H2C1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LHX5Q9H2C1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
LHX5Q9H2C1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
LHX5Q9H2C1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
LHX5Q9H2C1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LHX5Q9H2C1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LHX5Q9H2C1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
LHX5Q9H2C1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LHX5Q9H2C1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LHX5Q9H2C1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LHX5Q9H2C1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.44■□□□□ 0.86
LHX5Q9H2C1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LHX5Q9H2C1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.44■□□□□ 0.86
LHX5Q9H2C1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.44■□□□□ 0.86
LHX5Q9H2C1 RARRES2P10-201ENST00000564312 460 ntBASIC20.44■□□□□ 0.86
LHX5Q9H2C1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.44■□□□□ 0.86
LHX5Q9H2C1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.44■□□□□ 0.86
LHX5Q9H2C1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.44■□□□□ 0.86
LHX5Q9H2C1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.44■□□□□ 0.86
LHX5Q9H2C1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.44■□□□□ 0.86
LHX5Q9H2C1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LHX5Q9H2C1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LHX5Q9H2C1 HTR7P1-201ENST00000538670 1336 ntBASIC20.44■□□□□ 0.86
LHX5Q9H2C1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.44■□□□□ 0.86
LHX5Q9H2C1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LHX5Q9H2C1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
LHX5Q9H2C1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LHX5Q9H2C1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LHX5Q9H2C1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.44■□□□□ 0.86
LHX5Q9H2C1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
LHX5Q9H2C1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
LHX5Q9H2C1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LHX5Q9H2C1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
LHX5Q9H2C1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LHX5Q9H2C1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LHX5Q9H2C1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LHX5Q9H2C1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms