Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM2Q9C040 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TRIM2Q9C040 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TRIM2Q9C040 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM2Q9C040 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM2Q9C040 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM2Q9C040 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM2Q9C040 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM2Q9C040 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.81■□□□□ 0.44
TRIM2Q9C040 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.81■□□□□ 0.44
TRIM2Q9C040 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM2Q9C040 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.81■□□□□ 0.44
TRIM2Q9C040 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM2Q9C040 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM2Q9C040 SOX15-203ENST00000570788 1093 ntBASIC17.81■□□□□ 0.44
TRIM2Q9C040 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM2Q9C040 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM2Q9C040 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM2Q9C040 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TRIM2Q9C040 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM2Q9C040 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM2Q9C040 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRIM2Q9C040 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM2Q9C040 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.81■□□□□ 0.44
TRIM2Q9C040 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM2Q9C040 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM2Q9C040 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM2Q9C040 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM2Q9C040 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM2Q9C040 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM2Q9C040 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM2Q9C040 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM2Q9C040 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM2Q9C040 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM2Q9C040 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM2Q9C040 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM2Q9C040 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM2Q9C040 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
TRIM2Q9C040 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM2Q9C040 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM2Q9C040 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.8■□□□□ 0.44
TRIM2Q9C040 AL121829.2-201ENST00000620908 328 ntBASIC17.8■□□□□ 0.44
TRIM2Q9C040 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM2Q9C040 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM2Q9C040 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM2Q9C040 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM2Q9C040 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM2Q9C040 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM2Q9C040 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM2Q9C040 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM2Q9C040 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM2Q9C040 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM2Q9C040 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM2Q9C040 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM2Q9C040 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM2Q9C040 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM2Q9C040 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TRIM2Q9C040 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM2Q9C040 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM2Q9C040 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM2Q9C040 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM2Q9C040 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TRIM2Q9C040 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM2Q9C040 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM2Q9C040 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
TRIM2Q9C040 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM2Q9C040 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM2Q9C040 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRIM2Q9C040 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM2Q9C040 AC008687.6-201ENST00000596318 630 ntBASIC17.79■□□□□ 0.44
TRIM2Q9C040 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM2Q9C040 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TRIM2Q9C040 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM2Q9C040 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM2Q9C040 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM2Q9C040 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM2Q9C040 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM2Q9C040 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM2Q9C040 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM2Q9C040 AC120498.9-201ENST00000339021 3867 ntBASIC17.78■□□□□ 0.44
TRIM2Q9C040 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
TRIM2Q9C040 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.78■□□□□ 0.44
TRIM2Q9C040 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM2Q9C040 ZNF815P-204ENST00000434898 1737 ntBASIC17.78■□□□□ 0.44
TRIM2Q9C040 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TRIM2Q9C040 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM2Q9C040 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM2Q9C040 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.78■□□□□ 0.44
TRIM2Q9C040 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRIM2Q9C040 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRIM2Q9C040 KRT18P29-201ENST00000397031 1267 ntBASIC17.78■□□□□ 0.44
TRIM2Q9C040 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM2Q9C040 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.78■□□□□ 0.44
TRIM2Q9C040 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM2Q9C040 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM2Q9C040 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.78■□□□□ 0.44
TRIM2Q9C040 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM2Q9C040 AC066615.1-201ENST00000640911 628 ntBASIC17.78■□□□□ 0.44
TRIM2Q9C040 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM2Q9C040 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms