Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.09■□□□□ 0.65
CCM2Q9BSQ5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCM2Q9BSQ5 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCM2Q9BSQ5 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCM2Q9BSQ5 NIFKP9-201ENST00000419265 221 ntBASIC19.09■□□□□ 0.65
CCM2Q9BSQ5 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCM2Q9BSQ5 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.09■□□□□ 0.65
CCM2Q9BSQ5 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.09■□□□□ 0.65
CCM2Q9BSQ5 AC093827.2-201ENST00000512654 315 ntBASIC19.09■□□□□ 0.65
CCM2Q9BSQ5 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.09■□□□□ 0.65
CCM2Q9BSQ5 Z99916.2-201ENST00000604037 246 ntBASIC19.09■□□□□ 0.65
CCM2Q9BSQ5 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.09■□□□□ 0.65
CCM2Q9BSQ5 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCM2Q9BSQ5 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.09■□□□□ 0.65
CCM2Q9BSQ5 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCM2Q9BSQ5 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.09■□□□□ 0.65
CCM2Q9BSQ5 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCM2Q9BSQ5 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCM2Q9BSQ5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CCM2Q9BSQ5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CCM2Q9BSQ5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.08■□□□□ 0.65
CCM2Q9BSQ5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCM2Q9BSQ5 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CCM2Q9BSQ5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCM2Q9BSQ5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.08■□□□□ 0.64
CCM2Q9BSQ5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.08■□□□□ 0.64
CCM2Q9BSQ5 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.08■□□□□ 0.64
CCM2Q9BSQ5 AC073195.1-201ENST00000607241 877 ntBASIC19.08■□□□□ 0.64
CCM2Q9BSQ5 HLA-A-209ENST00000638375 975 ntBASIC19.08■□□□□ 0.64
CCM2Q9BSQ5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.08■□□□□ 0.64
CCM2Q9BSQ5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.08■□□□□ 0.64
CCM2Q9BSQ5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
CCM2Q9BSQ5 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCM2Q9BSQ5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CCM2Q9BSQ5 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCM2Q9BSQ5 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCM2Q9BSQ5 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.07■□□□□ 0.64
CCM2Q9BSQ5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
CCM2Q9BSQ5 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCM2Q9BSQ5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCM2Q9BSQ5 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CCM2Q9BSQ5 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CCM2Q9BSQ5 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCM2Q9BSQ5 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CCM2Q9BSQ5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCM2Q9BSQ5 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.07■□□□□ 0.64
CCM2Q9BSQ5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCM2Q9BSQ5 KSR1P1-201ENST00000446298 240 ntBASIC19.07■□□□□ 0.64
CCM2Q9BSQ5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CCM2Q9BSQ5 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.07■□□□□ 0.64
CCM2Q9BSQ5 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.07■□□□□ 0.64
CCM2Q9BSQ5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCM2Q9BSQ5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.07■□□□□ 0.64
CCM2Q9BSQ5 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.07■□□□□ 0.64
CCM2Q9BSQ5 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CCM2Q9BSQ5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCM2Q9BSQ5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.06■□□□□ 0.64
CCM2Q9BSQ5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCM2Q9BSQ5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCM2Q9BSQ5 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.06■□□□□ 0.64
CCM2Q9BSQ5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCM2Q9BSQ5 ZNF815P-204ENST00000434898 1737 ntBASIC19.06■□□□□ 0.64
CCM2Q9BSQ5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CCM2Q9BSQ5 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCM2Q9BSQ5 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCM2Q9BSQ5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.06■□□□□ 0.64
CCM2Q9BSQ5 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCM2Q9BSQ5 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCM2Q9BSQ5 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.06■□□□□ 0.64
CCM2Q9BSQ5 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCM2Q9BSQ5 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.06■□□□□ 0.64
CCM2Q9BSQ5 AL049637.2-201ENST00000641778 930 ntBASIC19.06■□□□□ 0.64
CCM2Q9BSQ5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCM2Q9BSQ5 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCM2Q9BSQ5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCM2Q9BSQ5 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CCM2Q9BSQ5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CCM2Q9BSQ5 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.05■□□□□ 0.64
CCM2Q9BSQ5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.05■□□□□ 0.64
CCM2Q9BSQ5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCM2Q9BSQ5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCM2Q9BSQ5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCM2Q9BSQ5 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCM2Q9BSQ5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.05■□□□□ 0.64
CCM2Q9BSQ5 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCM2Q9BSQ5 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCM2Q9BSQ5 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.05■□□□□ 0.64
CCM2Q9BSQ5 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.05■□□□□ 0.64
CCM2Q9BSQ5 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.05■□□□□ 0.64
CCM2Q9BSQ5 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.05■□□□□ 0.64
CCM2Q9BSQ5 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCM2Q9BSQ5 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCM2Q9BSQ5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCM2Q9BSQ5 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.05■□□□□ 0.64
CCM2Q9BSQ5 AL445675.2-201ENST00000620291 557 ntBASIC19.05■□□□□ 0.64
CCM2Q9BSQ5 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.05■□□□□ 0.64
CCM2Q9BSQ5 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCM2Q9BSQ5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCM2Q9BSQ5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCM2Q9BSQ5 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms