Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPPED1Q9BRF8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.21■□□□□ 0.51
CPPED1Q9BRF8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPPED1Q9BRF8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.21■□□□□ 0.51
CPPED1Q9BRF8 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.21■□□□□ 0.51
CPPED1Q9BRF8 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.21■□□□□ 0.51
CPPED1Q9BRF8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPPED1Q9BRF8 AF201337.1-201ENST00000520239 748 ntBASIC18.21■□□□□ 0.51
CPPED1Q9BRF8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.21■□□□□ 0.51
CPPED1Q9BRF8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.21■□□□□ 0.51
CPPED1Q9BRF8 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.21■□□□□ 0.51
CPPED1Q9BRF8 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.21■□□□□ 0.51
CPPED1Q9BRF8 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPPED1Q9BRF8 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPPED1Q9BRF8 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPPED1Q9BRF8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.21■□□□□ 0.51
CPPED1Q9BRF8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPPED1Q9BRF8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPPED1Q9BRF8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.21■□□□□ 0.51
CPPED1Q9BRF8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CPPED1Q9BRF8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPPED1Q9BRF8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPPED1Q9BRF8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 AC022517.1-201ENST00000592429 346 ntBASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CPPED1Q9BRF8 AC104581.1-202ENST00000635932 2618 ntBASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 RPS2P52-201ENST00000469610 820 ntBASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 AC006557.6-201ENST00000623071 864 ntBASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 AC073111.5-205ENST00000641717 521 ntBASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPPED1Q9BRF8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.18■□□□□ 0.5
CPPED1Q9BRF8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPPED1Q9BRF8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPPED1Q9BRF8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPPED1Q9BRF8 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CPPED1Q9BRF8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.18■□□□□ 0.5
CPPED1Q9BRF8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.18■□□□□ 0.5
CPPED1Q9BRF8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPPED1Q9BRF8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms