Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 AC211429.1-201ENST00000415277 523 ntBASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 AC097488.1-201ENST00000507834 756 ntBASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.13■□□□□ 0.81
CDK5RAP1Q96SZ6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.12■□□□□ 0.81
CDK5RAP1Q96SZ6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CDK5RAP1Q96SZ6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CDK5RAP1Q96SZ6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CDK5RAP1Q96SZ6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDK5RAP1Q96SZ6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.12■□□□□ 0.81
CDK5RAP1Q96SZ6 AC091390.4-202ENST00000476426 537 ntBASIC20.12■□□□□ 0.81
CDK5RAP1Q96SZ6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.12■□□□□ 0.81
CDK5RAP1Q96SZ6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDK5RAP1Q96SZ6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDK5RAP1Q96SZ6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CDK5RAP1Q96SZ6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDK5RAP1Q96SZ6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDK5RAP1Q96SZ6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 ZNF815P-204ENST00000434898 1737 ntBASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 NAPSB-206ENST00000562112 1266 ntBASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 AC133561.5-201ENST00000635547 218 ntBASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDK5RAP1Q96SZ6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 AC096733.2-201ENST00000609937 1394 ntBASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 C2orf69P3-201ENST00000565542 1120 ntBASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 SLC25A1P4-201ENST00000567977 778 ntBASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 AC097493.4-201ENST00000641197 219 ntBASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDK5RAP1Q96SZ6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDK5RAP1Q96SZ6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDK5RAP1Q96SZ6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.09■□□□□ 0.81
CDK5RAP1Q96SZ6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDK5RAP1Q96SZ6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.09■□□□□ 0.81
CDK5RAP1Q96SZ6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms