Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.93■□□□□ 0.78
C9orf72Q96LT7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
C9orf72Q96LT7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
C9orf72Q96LT7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
C9orf72Q96LT7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
C9orf72Q96LT7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
C9orf72Q96LT7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
C9orf72Q96LT7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
C9orf72Q96LT7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
C9orf72Q96LT7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
C9orf72Q96LT7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
C9orf72Q96LT7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
C9orf72Q96LT7 LSM12P1-201ENST00000411836 588 ntBASIC19.92■□□□□ 0.78
C9orf72Q96LT7 FAM201B-201ENST00000458407 597 ntBASIC19.92■□□□□ 0.78
C9orf72Q96LT7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.92■□□□□ 0.78
C9orf72Q96LT7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.92■□□□□ 0.78
C9orf72Q96LT7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.92■□□□□ 0.78
C9orf72Q96LT7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.92■□□□□ 0.78
C9orf72Q96LT7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
C9orf72Q96LT7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.92■□□□□ 0.78
C9orf72Q96LT7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
C9orf72Q96LT7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.92■□□□□ 0.78
C9orf72Q96LT7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
C9orf72Q96LT7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.92■□□□□ 0.78
C9orf72Q96LT7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
C9orf72Q96LT7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
C9orf72Q96LT7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
C9orf72Q96LT7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
C9orf72Q96LT7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 AL049812.1-201ENST00000432563 2267 ntBASIC19.91■□□□□ 0.78
C9orf72Q96LT7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.91■□□□□ 0.78
C9orf72Q96LT7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 CROCCP3-202ENST00000420820 1947 ntBASIC19.91■□□□□ 0.78
C9orf72Q96LT7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 AL161938.1-201ENST00000569833 2180 ntBASIC19.91■□□□□ 0.78
C9orf72Q96LT7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf72Q96LT7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
C9orf72Q96LT7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C9orf72Q96LT7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
C9orf72Q96LT7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
C9orf72Q96LT7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
C9orf72Q96LT7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.9■□□□□ 0.78
C9orf72Q96LT7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.9■□□□□ 0.78
C9orf72Q96LT7 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.9■□□□□ 0.78
C9orf72Q96LT7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.9■□□□□ 0.78
C9orf72Q96LT7 AC023632.3-201ENST00000521633 145 ntBASIC19.9■□□□□ 0.78
C9orf72Q96LT7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.9■□□□□ 0.78
C9orf72Q96LT7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
C9orf72Q96LT7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.9■□□□□ 0.78
C9orf72Q96LT7 AL138781.2-201ENST00000617896 1843 ntBASIC19.9■□□□□ 0.78
C9orf72Q96LT7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
C9orf72Q96LT7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.9■□□□□ 0.78
C9orf72Q96LT7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
C9orf72Q96LT7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.9■□□□□ 0.78
C9orf72Q96LT7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C9orf72Q96LT7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
C9orf72Q96LT7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.9■□□□□ 0.78
C9orf72Q96LT7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.89■□□□□ 0.78
C9orf72Q96LT7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
C9orf72Q96LT7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
C9orf72Q96LT7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C9orf72Q96LT7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.89■□□□□ 0.77
C9orf72Q96LT7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C9orf72Q96LT7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
C9orf72Q96LT7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C9orf72Q96LT7 KRT17P1-201ENST00000399211 1546 ntBASIC19.89■□□□□ 0.77
C9orf72Q96LT7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.89■□□□□ 0.77
C9orf72Q96LT7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.89■□□□□ 0.77
C9orf72Q96LT7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
C9orf72Q96LT7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.89■□□□□ 0.77
C9orf72Q96LT7 C2orf69P4-201ENST00000565394 541 ntBASIC19.89■□□□□ 0.77
C9orf72Q96LT7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.89■□□□□ 0.77
C9orf72Q96LT7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.89■□□□□ 0.77
C9orf72Q96LT7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms