Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX27Q96L92 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.95■□□□□ 0.94
SNX27Q96L92 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SNX27Q96L92 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
SNX27Q96L92 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX27Q96L92 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.95■□□□□ 0.94
SNX27Q96L92 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX27Q96L92 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX27Q96L92 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SNX27Q96L92 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX27Q96L92 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SNX27Q96L92 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.95■□□□□ 0.94
SNX27Q96L92 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.95■□□□□ 0.94
SNX27Q96L92 AC091390.4-202ENST00000476426 537 ntBASIC20.95■□□□□ 0.94
SNX27Q96L92 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.95■□□□□ 0.94
SNX27Q96L92 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.95■□□□□ 0.94
SNX27Q96L92 AP005242.2-201ENST00000580065 1175 ntBASIC20.95■□□□□ 0.94
SNX27Q96L92 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.95■□□□□ 0.94
SNX27Q96L92 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.95■□□□□ 0.94
SNX27Q96L92 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.95■□□□□ 0.94
SNX27Q96L92 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.95■□□□□ 0.94
SNX27Q96L92 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SNX27Q96L92 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX27Q96L92 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX27Q96L92 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX27Q96L92 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SNX27Q96L92 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX27Q96L92 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX27Q96L92 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX27Q96L92 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX27Q96L92 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX27Q96L92 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNX27Q96L92 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX27Q96L92 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SNX27Q96L92 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
SNX27Q96L92 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.94■□□□□ 0.94
SNX27Q96L92 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.94■□□□□ 0.94
SNX27Q96L92 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.94■□□□□ 0.94
SNX27Q96L92 AP000692.2-201ENST00000608391 879 ntBASIC20.94■□□□□ 0.94
SNX27Q96L92 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX27Q96L92 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.94■□□□□ 0.94
SNX27Q96L92 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX27Q96L92 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX27Q96L92 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX27Q96L92 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNX27Q96L92 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.94■□□□□ 0.94
SNX27Q96L92 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.93■□□□□ 0.94
SNX27Q96L92 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.93■□□□□ 0.94
SNX27Q96L92 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX27Q96L92 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX27Q96L92 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.93■□□□□ 0.94
SNX27Q96L92 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX27Q96L92 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
SNX27Q96L92 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.93■□□□□ 0.94
SNX27Q96L92 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SNX27Q96L92 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.93■□□□□ 0.94
SNX27Q96L92 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.93■□□□□ 0.94
SNX27Q96L92 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.93■□□□□ 0.94
SNX27Q96L92 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.93■□□□□ 0.94
SNX27Q96L92 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.93■□□□□ 0.94
SNX27Q96L92 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX27Q96L92 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SNX27Q96L92 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.93■□□□□ 0.94
SNX27Q96L92 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX27Q96L92 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX27Q96L92 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
SNX27Q96L92 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX27Q96L92 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.92■□□□□ 0.94
SNX27Q96L92 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.92■□□□□ 0.94
SNX27Q96L92 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SNX27Q96L92 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX27Q96L92 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.92■□□□□ 0.94
SNX27Q96L92 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX27Q96L92 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX27Q96L92 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX27Q96L92 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.92■□□□□ 0.94
SNX27Q96L92 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX27Q96L92 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SNX27Q96L92 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.92■□□□□ 0.94
SNX27Q96L92 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX27Q96L92 FAM207BP-201ENST00000447172 505 ntBASIC20.92■□□□□ 0.94
SNX27Q96L92 AC097488.1-201ENST00000507834 756 ntBASIC20.92■□□□□ 0.94
SNX27Q96L92 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.92■□□□□ 0.94
SNX27Q96L92 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.92■□□□□ 0.94
SNX27Q96L92 AC092865.7-201ENST00000641832 219 ntBASIC20.92■□□□□ 0.94
SNX27Q96L92 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX27Q96L92 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX27Q96L92 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SNX27Q96L92 CYP2D8P-201ENST00000433633 1490 ntBASIC20.92■□□□□ 0.94
SNX27Q96L92 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX27Q96L92 KRT8P41-201ENST00000533985 1514 ntBASIC20.92■□□□□ 0.94
SNX27Q96L92 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX27Q96L92 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX27Q96L92 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.92■□□□□ 0.94
SNX27Q96L92 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SNX27Q96L92 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX27Q96L92 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SNX27Q96L92 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.92■□□□□ 0.94
SNX27Q96L92 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNX27Q96L92 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms