Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS50Q96JG6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
VPS50Q96JG6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS50Q96JG6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS50Q96JG6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS50Q96JG6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
VPS50Q96JG6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VPS50Q96JG6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
VPS50Q96JG6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS50Q96JG6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS50Q96JG6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.91■□□□□ 0.62
VPS50Q96JG6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.91■□□□□ 0.62
VPS50Q96JG6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.91■□□□□ 0.62
VPS50Q96JG6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS50Q96JG6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.91■□□□□ 0.62
VPS50Q96JG6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.91■□□□□ 0.62
VPS50Q96JG6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.91■□□□□ 0.62
VPS50Q96JG6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
VPS50Q96JG6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
VPS50Q96JG6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS50Q96JG6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS50Q96JG6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.91■□□□□ 0.62
VPS50Q96JG6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.91■□□□□ 0.62
VPS50Q96JG6 C1QBPP2-201ENST00000528754 825 ntBASIC18.91■□□□□ 0.62
VPS50Q96JG6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.91■□□□□ 0.62
VPS50Q96JG6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
VPS50Q96JG6 RN7SL471P-201ENST00000580476 299 ntBASIC18.91■□□□□ 0.62
VPS50Q96JG6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.91■□□□□ 0.62
VPS50Q96JG6 AC069544.1-201ENST00000609399 999 ntBASIC18.91■□□□□ 0.62
VPS50Q96JG6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VPS50Q96JG6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS50Q96JG6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
VPS50Q96JG6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS50Q96JG6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS50Q96JG6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.91■□□□□ 0.62
VPS50Q96JG6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
VPS50Q96JG6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VPS50Q96JG6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
VPS50Q96JG6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VPS50Q96JG6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VPS50Q96JG6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS50Q96JG6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.9■□□□□ 0.62
VPS50Q96JG6 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.9■□□□□ 0.62
VPS50Q96JG6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
VPS50Q96JG6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VPS50Q96JG6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VPS50Q96JG6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS50Q96JG6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.9■□□□□ 0.62
VPS50Q96JG6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.9■□□□□ 0.62
VPS50Q96JG6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.9■□□□□ 0.62
VPS50Q96JG6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS50Q96JG6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.9■□□□□ 0.62
VPS50Q96JG6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.9■□□□□ 0.62
VPS50Q96JG6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VPS50Q96JG6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.9■□□□□ 0.62
VPS50Q96JG6 AL359736.2-201ENST00000621992 437 ntBASIC18.9■□□□□ 0.62
VPS50Q96JG6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS50Q96JG6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VPS50Q96JG6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VPS50Q96JG6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VPS50Q96JG6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS50Q96JG6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS50Q96JG6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.9■□□□□ 0.62
VPS50Q96JG6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
VPS50Q96JG6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
VPS50Q96JG6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
VPS50Q96JG6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS50Q96JG6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS50Q96JG6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.89■□□□□ 0.61
VPS50Q96JG6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.89■□□□□ 0.61
VPS50Q96JG6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS50Q96JG6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS50Q96JG6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.89■□□□□ 0.61
VPS50Q96JG6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS50Q96JG6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
VPS50Q96JG6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS50Q96JG6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VPS50Q96JG6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS50Q96JG6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
VPS50Q96JG6 RPS2P4-201ENST00000476944 856 ntBASIC18.89■□□□□ 0.61
VPS50Q96JG6 RPPH1-201ENST00000516869 333 ntBASIC18.89■□□□□ 0.61
VPS50Q96JG6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
VPS50Q96JG6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
VPS50Q96JG6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.61
VPS50Q96JG6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS50Q96JG6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.89■□□□□ 0.61
VPS50Q96JG6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VPS50Q96JG6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VPS50Q96JG6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
VPS50Q96JG6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS50Q96JG6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
VPS50Q96JG6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
VPS50Q96JG6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.89■□□□□ 0.61
VPS50Q96JG6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS50Q96JG6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
VPS50Q96JG6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS50Q96JG6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS50Q96JG6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS50Q96JG6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
VPS50Q96JG6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms