Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SIPA1Q96FS4 AC092338.2-201ENST00000568827 1415 ntBASIC19.43■□□□□ 0.7
SIPA1Q96FS4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SIPA1Q96FS4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.43■□□□□ 0.7
SIPA1Q96FS4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
SIPA1Q96FS4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIPA1Q96FS4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIPA1Q96FS4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIPA1Q96FS4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
SIPA1Q96FS4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.43■□□□□ 0.7
SIPA1Q96FS4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIPA1Q96FS4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.43■□□□□ 0.7
SIPA1Q96FS4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIPA1Q96FS4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.43■□□□□ 0.7
SIPA1Q96FS4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.43■□□□□ 0.7
SIPA1Q96FS4 AC009237.14-201ENST00000609975 1594 ntBASIC19.43■□□□□ 0.7
SIPA1Q96FS4 AL137060.1-201ENST00000618151 2648 ntBASIC19.43■□□□□ 0.7
SIPA1Q96FS4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIPA1Q96FS4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIPA1Q96FS4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SIPA1Q96FS4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.43■□□□□ 0.7
SIPA1Q96FS4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SIPA1Q96FS4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIPA1Q96FS4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SIPA1Q96FS4 AP005212.1-201ENST00000581547 1997 ntBASIC19.43■□□□□ 0.7
SIPA1Q96FS4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 AC117947.1-201ENST00000427448 529 ntBASIC19.42■□□□□ 0.7
SIPA1Q96FS4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 AL023803.3-201ENST00000615559 522 ntBASIC19.42■□□□□ 0.7
SIPA1Q96FS4 AL138966.2-201ENST00000621997 464 ntBASIC19.42■□□□□ 0.7
SIPA1Q96FS4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.42■□□□□ 0.7
SIPA1Q96FS4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.41■□□□□ 0.7
SIPA1Q96FS4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIPA1Q96FS4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.41■□□□□ 0.7
SIPA1Q96FS4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIPA1Q96FS4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SIPA1Q96FS4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIPA1Q96FS4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIPA1Q96FS4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIPA1Q96FS4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIPA1Q96FS4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.41■□□□□ 0.7
SIPA1Q96FS4 AC022616.7-201ENST00000525383 220 ntBASIC19.41■□□□□ 0.7
SIPA1Q96FS4 AL353719.1-201ENST00000566847 864 ntBASIC19.41■□□□□ 0.7
SIPA1Q96FS4 AC139887.4-201ENST00000607877 719 ntBASIC19.41■□□□□ 0.7
SIPA1Q96FS4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.41■□□□□ 0.7
SIPA1Q96FS4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIPA1Q96FS4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIPA1Q96FS4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIPA1Q96FS4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SIPA1Q96FS4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SIPA1Q96FS4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.41■□□□□ 0.7
SIPA1Q96FS4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.4■□□□□ 0.7
SIPA1Q96FS4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIPA1Q96FS4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIPA1Q96FS4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SIPA1Q96FS4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIPA1Q96FS4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIPA1Q96FS4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIPA1Q96FS4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIPA1Q96FS4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIPA1Q96FS4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIPA1Q96FS4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SIPA1Q96FS4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SIPA1Q96FS4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIPA1Q96FS4 AC063952.2-201ENST00000498792 1227 ntBASIC19.4■□□□□ 0.7
SIPA1Q96FS4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SIPA1Q96FS4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.4■□□□□ 0.7
SIPA1Q96FS4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms