Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP9XQ93008 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP9XQ93008 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
USP9XQ93008 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP9XQ93008 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP9XQ93008 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.92■□□□□ 0.3
USP9XQ93008 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP9XQ93008 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP9XQ93008 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP9XQ93008 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.92■□□□□ 0.3
USP9XQ93008 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
USP9XQ93008 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP9XQ93008 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.92■□□□□ 0.3
USP9XQ93008 TPSP2-201ENST00000561760 610 ntBASIC16.92■□□□□ 0.3
USP9XQ93008 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP9XQ93008 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP9XQ93008 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
USP9XQ93008 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP9XQ93008 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.92■□□□□ 0.3
USP9XQ93008 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP9XQ93008 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP9XQ93008 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP9XQ93008 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP9XQ93008 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP9XQ93008 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP9XQ93008 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
USP9XQ93008 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP9XQ93008 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
USP9XQ93008 AP002414.4-201ENST00000589764 1148 ntBASIC16.91■□□□□ 0.3
USP9XQ93008 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP9XQ93008 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP9XQ93008 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.91■□□□□ 0.3
USP9XQ93008 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP9XQ93008 AC093525.10-201ENST00000625130 1569 ntBASIC16.91■□□□□ 0.3
USP9XQ93008 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
USP9XQ93008 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
USP9XQ93008 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.91■□□□□ 0.3
USP9XQ93008 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USP9XQ93008 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP9XQ93008 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP9XQ93008 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.9■□□□□ 0.3
USP9XQ93008 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP9XQ93008 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USP9XQ93008 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
USP9XQ93008 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USP9XQ93008 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP9XQ93008 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USP9XQ93008 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.9■□□□□ 0.3
USP9XQ93008 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.9■□□□□ 0.3
USP9XQ93008 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP9XQ93008 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
USP9XQ93008 BX842568.4-201ENST00000421222 227 ntBASIC16.9■□□□□ 0.3
USP9XQ93008 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.9■□□□□ 0.3
USP9XQ93008 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.9■□□□□ 0.3
USP9XQ93008 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP9XQ93008 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USP9XQ93008 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.9■□□□□ 0.3
USP9XQ93008 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.9■□□□□ 0.3
USP9XQ93008 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP9XQ93008 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
USP9XQ93008 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP9XQ93008 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
USP9XQ93008 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
USP9XQ93008 TSPY22P-201ENST00000427496 604 ntBASIC16.89■□□□□ 0.3
USP9XQ93008 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.89■□□□□ 0.3
USP9XQ93008 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
USP9XQ93008 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.89■□□□□ 0.3
USP9XQ93008 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.89■□□□□ 0.3
USP9XQ93008 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP9XQ93008 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP9XQ93008 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP9XQ93008 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP9XQ93008 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.89■□□□□ 0.29
USP9XQ93008 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.89■□□□□ 0.29
USP9XQ93008 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP9XQ93008 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
USP9XQ93008 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP9XQ93008 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
USP9XQ93008 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.89■□□□□ 0.29
USP9XQ93008 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
USP9XQ93008 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
USP9XQ93008 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.89■□□□□ 0.29
USP9XQ93008 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
USP9XQ93008 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.89■□□□□ 0.29
USP9XQ93008 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP9XQ93008 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP9XQ93008 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
USP9XQ93008 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP9XQ93008 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP9XQ93008 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP9XQ93008 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.88■□□□□ 0.29
USP9XQ93008 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP9XQ93008 REXO1L6P-202ENST00000619970 1078 ntBASIC16.88■□□□□ 0.29
USP9XQ93008 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP9XQ93008 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP9XQ93008 LINC00167-201ENST00000530583 1419 ntBASIC16.88■□□□□ 0.29
USP9XQ93008 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP9XQ93008 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP9XQ93008 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP9XQ93008 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms