Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.67■□□□□ 0.9
DDX1Q92499 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DDX1Q92499 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.67■□□□□ 0.9
DDX1Q92499 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DDX1Q92499 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX1Q92499 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DDX1Q92499 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX1Q92499 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.67■□□□□ 0.9
DDX1Q92499 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
DDX1Q92499 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.67■□□□□ 0.9
DDX1Q92499 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
DDX1Q92499 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
DDX1Q92499 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX1Q92499 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX1Q92499 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DDX1Q92499 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX1Q92499 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX1Q92499 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX1Q92499 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX1Q92499 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX1Q92499 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
DDX1Q92499 AC087289.5-201ENST00000586076 3175 ntBASIC20.66■□□□□ 0.9
DDX1Q92499 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX1Q92499 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX1Q92499 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX1Q92499 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
DDX1Q92499 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX1Q92499 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.66■□□□□ 0.9
DDX1Q92499 TUBB8P6-201ENST00000436895 1288 ntBASIC20.66■□□□□ 0.9
DDX1Q92499 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.66■□□□□ 0.9
DDX1Q92499 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.66■□□□□ 0.9
DDX1Q92499 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.66■□□□□ 0.9
DDX1Q92499 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DDX1Q92499 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.66■□□□□ 0.9
DDX1Q92499 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DDX1Q92499 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
DDX1Q92499 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
DDX1Q92499 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
DDX1Q92499 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.66■□□□□ 0.9
DDX1Q92499 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX1Q92499 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DDX1Q92499 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DDX1Q92499 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.66■□□□□ 0.9
DDX1Q92499 SDHAP1-207ENST00000440850 2000 ntBASIC20.66■□□□□ 0.9
DDX1Q92499 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DDX1Q92499 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DDX1Q92499 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX1Q92499 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
DDX1Q92499 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX1Q92499 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX1Q92499 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX1Q92499 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX1Q92499 AP000974.1-201ENST00000623909 2387 ntBASIC20.65■□□□□ 0.9
DDX1Q92499 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DDX1Q92499 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
DDX1Q92499 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX1Q92499 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.65■□□□□ 0.9
DDX1Q92499 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.65■□□□□ 0.9
DDX1Q92499 TEX21P-204ENST00000641479 1693 ntBASIC20.65■□□□□ 0.9
DDX1Q92499 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX1Q92499 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX1Q92499 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
DDX1Q92499 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.65■□□□□ 0.9
DDX1Q92499 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.65■□□□□ 0.9
DDX1Q92499 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.65■□□□□ 0.9
DDX1Q92499 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
DDX1Q92499 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DDX1Q92499 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
DDX1Q92499 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
DDX1Q92499 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
DDX1Q92499 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
DDX1Q92499 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
DDX1Q92499 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.64■□□□□ 0.9
DDX1Q92499 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
DDX1Q92499 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
DDX1Q92499 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX1Q92499 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
DDX1Q92499 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX1Q92499 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DDX1Q92499 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DDX1Q92499 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.64■□□□□ 0.89
DDX1Q92499 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DDX1Q92499 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.64■□□□□ 0.89
DDX1Q92499 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.64■□□□□ 0.89
DDX1Q92499 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DDX1Q92499 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.64■□□□□ 0.89
DDX1Q92499 RN7SL471P-201ENST00000580476 299 ntBASIC20.64■□□□□ 0.89
DDX1Q92499 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
DDX1Q92499 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX1Q92499 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.64■□□□□ 0.89
DDX1Q92499 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX1Q92499 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX1Q92499 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX1Q92499 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DDX1Q92499 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.63■□□□□ 0.89
DDX1Q92499 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.63■□□□□ 0.89
DDX1Q92499 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DDX1Q92499 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DDX1Q92499 NBPF21P-201ENST00000425093 1451 ntBASIC20.63■□□□□ 0.89
DDX1Q92499 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms