Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCG3Q8WXD2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCG3Q8WXD2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCG3Q8WXD2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCG3Q8WXD2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.82■□□□□ 0.76
SCG3Q8WXD2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCG3Q8WXD2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SCG3Q8WXD2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCG3Q8WXD2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.82■□□□□ 0.76
SCG3Q8WXD2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCG3Q8WXD2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.81■□□□□ 0.76
SCG3Q8WXD2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCG3Q8WXD2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
SCG3Q8WXD2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCG3Q8WXD2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCG3Q8WXD2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.81■□□□□ 0.76
SCG3Q8WXD2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SCG3Q8WXD2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCG3Q8WXD2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SCG3Q8WXD2 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SCG3Q8WXD2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
SCG3Q8WXD2 AC233263.1-201ENST00000578059 224 ntBASIC19.81■□□□□ 0.76
SCG3Q8WXD2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SCG3Q8WXD2 AC006557.6-201ENST00000623071 864 ntBASIC19.81■□□□□ 0.76
SCG3Q8WXD2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCG3Q8WXD2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SCG3Q8WXD2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SCG3Q8WXD2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCG3Q8WXD2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCG3Q8WXD2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCG3Q8WXD2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SCG3Q8WXD2 AC138932.1-201ENST00000534164 6830 ntBASIC19.81■□□□□ 0.76
SCG3Q8WXD2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SCG3Q8WXD2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.81■□□□□ 0.76
SCG3Q8WXD2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.81■□□□□ 0.76
SCG3Q8WXD2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCG3Q8WXD2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCG3Q8WXD2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 AL596275.1-201ENST00000423464 877 ntBASIC19.79■□□□□ 0.76
SCG3Q8WXD2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCG3Q8WXD2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms