Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SLC44A1Q8WWI5 AC022517.1-201ENST00000592429 346 ntBASIC19.42■□□□□ 0.7
SLC44A1Q8WWI5 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC44A1Q8WWI5 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SLC44A1Q8WWI5 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC44A1Q8WWI5 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC44A1Q8WWI5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.42■□□□□ 0.7
SLC44A1Q8WWI5 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC44A1Q8WWI5 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC44A1Q8WWI5 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC44A1Q8WWI5 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 AL390719.1-204ENST00000412397 1219 ntBASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 AC004911.1-201ENST00000416316 871 ntBASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 IKBKGP1-201ENST00000612193 1073 ntBASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC44A1Q8WWI5 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SLC44A1Q8WWI5 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC44A1Q8WWI5 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.4■□□□□ 0.7
SLC44A1Q8WWI5 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC44A1Q8WWI5 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC44A1Q8WWI5 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.4■□□□□ 0.7
SLC44A1Q8WWI5 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.4■□□□□ 0.7
SLC44A1Q8WWI5 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.4■□□□□ 0.7
SLC44A1Q8WWI5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC44A1Q8WWI5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC44A1Q8WWI5 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC44A1Q8WWI5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC44A1Q8WWI5 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC44A1Q8WWI5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC44A1Q8WWI5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC44A1Q8WWI5 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC44A1Q8WWI5 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC44A1Q8WWI5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.4■□□□□ 0.7
SLC44A1Q8WWI5 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC44A1Q8WWI5 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SLC44A1Q8WWI5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SLC44A1Q8WWI5 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.39■□□□□ 0.7
SLC44A1Q8WWI5 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SLC44A1Q8WWI5 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SLC44A1Q8WWI5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.39■□□□□ 0.7
SLC44A1Q8WWI5 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SLC44A1Q8WWI5 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SLC44A1Q8WWI5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SLC44A1Q8WWI5 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SLC44A1Q8WWI5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC44A1Q8WWI5 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC44A1Q8WWI5 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.39■□□□□ 0.69
SLC44A1Q8WWI5 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SLC44A1Q8WWI5 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
SLC44A1Q8WWI5 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC44A1Q8WWI5 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC44A1Q8WWI5 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SLC44A1Q8WWI5 Z98044.1-201ENST00000632503 1764 ntBASIC19.39■□□□□ 0.69
SLC44A1Q8WWI5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC44A1Q8WWI5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC44A1Q8WWI5 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SLC44A1Q8WWI5 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC44A1Q8WWI5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC44A1Q8WWI5 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC44A1Q8WWI5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC44A1Q8WWI5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC44A1Q8WWI5 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SLC44A1Q8WWI5 AC007613.1-201ENST00000572811 2597 ntBASIC19.39■□□□□ 0.69
SLC44A1Q8WWI5 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC44A1Q8WWI5 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SLC44A1Q8WWI5 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC44A1Q8WWI5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC44A1Q8WWI5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC44A1Q8WWI5 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC44A1Q8WWI5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC44A1Q8WWI5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC44A1Q8WWI5 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms