Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SNED1Q8TER0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.66■■□□□ 1.38
SNED1Q8TER0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
SNED1Q8TER0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SNED1Q8TER0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
SNED1Q8TER0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SNED1Q8TER0 AC140113.3-201ENST00000605663 199 ntBASIC23.66■■□□□ 1.38
SNED1Q8TER0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SNED1Q8TER0 AP001271.2-201ENST00000624018 1556 ntBASIC23.66■■□□□ 1.38
SNED1Q8TER0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.65■■□□□ 1.38
SNED1Q8TER0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SNED1Q8TER0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SNED1Q8TER0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SNED1Q8TER0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SNED1Q8TER0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SNED1Q8TER0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
SNED1Q8TER0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SNED1Q8TER0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC23.65■■□□□ 1.38
SNED1Q8TER0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
SNED1Q8TER0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SNED1Q8TER0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SNED1Q8TER0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC23.65■■□□□ 1.38
SNED1Q8TER0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC23.65■■□□□ 1.38
SNED1Q8TER0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SNED1Q8TER0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.65■■□□□ 1.38
SNED1Q8TER0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.65■■□□□ 1.38
SNED1Q8TER0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.65■■□□□ 1.38
SNED1Q8TER0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SNED1Q8TER0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC23.64■■□□□ 1.38
SNED1Q8TER0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.38
SNED1Q8TER0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SNED1Q8TER0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SNED1Q8TER0 LINC01311-201ENST00000565162 1445 ntBASIC23.64■■□□□ 1.37
SNED1Q8TER0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
SNED1Q8TER0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SNED1Q8TER0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC23.64■■□□□ 1.37
SNED1Q8TER0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SNED1Q8TER0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC23.64■■□□□ 1.37
SNED1Q8TER0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SNED1Q8TER0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SNED1Q8TER0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SNED1Q8TER0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
SNED1Q8TER0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SNED1Q8TER0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.63■■□□□ 1.37
SNED1Q8TER0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC23.63■■□□□ 1.37
SNED1Q8TER0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.63■■□□□ 1.37
SNED1Q8TER0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23.63■■□□□ 1.37
SNED1Q8TER0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SNED1Q8TER0 HBZP1-201ENST00000354915 429 ntBASIC23.63■■□□□ 1.37
SNED1Q8TER0 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SNED1Q8TER0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SNED1Q8TER0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SNED1Q8TER0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SNED1Q8TER0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SNED1Q8TER0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SNED1Q8TER0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC23.62■■□□□ 1.37
SNED1Q8TER0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC23.62■■□□□ 1.37
SNED1Q8TER0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SNED1Q8TER0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SNED1Q8TER0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC23.62■■□□□ 1.37
SNED1Q8TER0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SNED1Q8TER0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SNED1Q8TER0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SNED1Q8TER0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.61■■□□□ 1.37
SNED1Q8TER0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC23.61■■□□□ 1.37
SNED1Q8TER0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC23.61■■□□□ 1.37
SNED1Q8TER0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SNED1Q8TER0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SNED1Q8TER0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SNED1Q8TER0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC23.61■■□□□ 1.37
SNED1Q8TER0 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC23.61■■□□□ 1.37
SNED1Q8TER0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC23.61■■□□□ 1.37
SNED1Q8TER0 AL691432.3-201ENST00000621860 400 ntBASIC23.61■■□□□ 1.37
SNED1Q8TER0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
SNED1Q8TER0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.61■■□□□ 1.37
SNED1Q8TER0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SNED1Q8TER0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC23.61■■□□□ 1.37
SNED1Q8TER0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.61■■□□□ 1.37
SNED1Q8TER0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SNED1Q8TER0 AL137060.1-201ENST00000618151 2648 ntBASIC23.61■■□□□ 1.37
SNED1Q8TER0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SNED1Q8TER0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.61■■□□□ 1.37
SNED1Q8TER0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SNED1Q8TER0 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SNED1Q8TER0 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SNED1Q8TER0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SNED1Q8TER0 PVRIG2P-201ENST00000435460 978 ntBASIC23.6■■□□□ 1.37
SNED1Q8TER0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC23.6■■□□□ 1.37
SNED1Q8TER0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC23.6■■□□□ 1.37
SNED1Q8TER0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC23.6■■□□□ 1.37
SNED1Q8TER0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC23.6■■□□□ 1.37
SNED1Q8TER0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SNED1Q8TER0 TBC1D3P2-202ENST00000577902 1649 ntBASIC23.6■■□□□ 1.37
SNED1Q8TER0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC23.6■■□□□ 1.37
SNED1Q8TER0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC23.6■■□□□ 1.37
SNED1Q8TER0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SNED1Q8TER0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
SNED1Q8TER0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
SNED1Q8TER0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23.6■■□□□ 1.37
SNED1Q8TER0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms