Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
SMARCC2Q8TAQ2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SMARCC2Q8TAQ2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SMARCC2Q8TAQ2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.71■■□□□ 1.23
SMARCC2Q8TAQ2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC22.71■■□□□ 1.23
SMARCC2Q8TAQ2 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SMARCC2Q8TAQ2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.71■■□□□ 1.23
SMARCC2Q8TAQ2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SMARCC2Q8TAQ2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SMARCC2Q8TAQ2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC22.71■■□□□ 1.23
SMARCC2Q8TAQ2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC22.71■■□□□ 1.23
SMARCC2Q8TAQ2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SMARCC2Q8TAQ2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SMARCC2Q8TAQ2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.71■■□□□ 1.23
SMARCC2Q8TAQ2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC22.71■■□□□ 1.23
SMARCC2Q8TAQ2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC22.7■■□□□ 1.23
SMARCC2Q8TAQ2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
SMARCC2Q8TAQ2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SMARCC2Q8TAQ2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SMARCC2Q8TAQ2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC22.7■■□□□ 1.22
SMARCC2Q8TAQ2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.7■■□□□ 1.22
SMARCC2Q8TAQ2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
SMARCC2Q8TAQ2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC22.7■■□□□ 1.22
SMARCC2Q8TAQ2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
SMARCC2Q8TAQ2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
SMARCC2Q8TAQ2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
SMARCC2Q8TAQ2 AC008550.1-201ENST00000511500 884 ntBASIC22.7■■□□□ 1.22
SMARCC2Q8TAQ2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.7■■□□□ 1.22
SMARCC2Q8TAQ2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC22.7■■□□□ 1.22
SMARCC2Q8TAQ2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SMARCC2Q8TAQ2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
SMARCC2Q8TAQ2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SMARCC2Q8TAQ2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SMARCC2Q8TAQ2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC22.7■■□□□ 1.22
SMARCC2Q8TAQ2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
SMARCC2Q8TAQ2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SMARCC2Q8TAQ2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SMARCC2Q8TAQ2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
SMARCC2Q8TAQ2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SMARCC2Q8TAQ2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
SMARCC2Q8TAQ2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SMARCC2Q8TAQ2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC22.69■■□□□ 1.22
SMARCC2Q8TAQ2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SMARCC2Q8TAQ2 NBPF21P-201ENST00000425093 1451 ntBASIC22.69■■□□□ 1.22
SMARCC2Q8TAQ2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.69■■□□□ 1.22
SMARCC2Q8TAQ2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
SMARCC2Q8TAQ2 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC22.69■■□□□ 1.22
SMARCC2Q8TAQ2 RPS2P4-201ENST00000476944 856 ntBASIC22.69■■□□□ 1.22
SMARCC2Q8TAQ2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC22.69■■□□□ 1.22
SMARCC2Q8TAQ2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC22.69■■□□□ 1.22
SMARCC2Q8TAQ2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SMARCC2Q8TAQ2 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.69■■□□□ 1.22
SMARCC2Q8TAQ2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.69■■□□□ 1.22
SMARCC2Q8TAQ2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.69■■□□□ 1.22
SMARCC2Q8TAQ2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
SMARCC2Q8TAQ2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
SMARCC2Q8TAQ2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
SMARCC2Q8TAQ2 ZNF815P-204ENST00000434898 1737 ntBASIC22.68■■□□□ 1.22
SMARCC2Q8TAQ2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SMARCC2Q8TAQ2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC22.68■■□□□ 1.22
SMARCC2Q8TAQ2 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SMARCC2Q8TAQ2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
SMARCC2Q8TAQ2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
SMARCC2Q8TAQ2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC22.68■■□□□ 1.22
SMARCC2Q8TAQ2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SMARCC2Q8TAQ2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC22.68■■□□□ 1.22
SMARCC2Q8TAQ2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
SMARCC2Q8TAQ2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SMARCC2Q8TAQ2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SMARCC2Q8TAQ2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC22.68■■□□□ 1.22
SMARCC2Q8TAQ2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC22.68■■□□□ 1.22
SMARCC2Q8TAQ2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.68■■□□□ 1.22
SMARCC2Q8TAQ2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.68■■□□□ 1.22
SMARCC2Q8TAQ2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.68■■□□□ 1.22
SMARCC2Q8TAQ2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SMARCC2Q8TAQ2 YBX1P10-201ENST00000444752 975 ntBASIC22.68■■□□□ 1.22
SMARCC2Q8TAQ2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC22.68■■□□□ 1.22
SMARCC2Q8TAQ2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
SMARCC2Q8TAQ2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SMARCC2Q8TAQ2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.68■■□□□ 1.22
SMARCC2Q8TAQ2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC22.68■■□□□ 1.22
SMARCC2Q8TAQ2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SMARCC2Q8TAQ2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
SMARCC2Q8TAQ2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SMARCC2Q8TAQ2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SMARCC2Q8TAQ2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SMARCC2Q8TAQ2 AP006587.1-201ENST00000534129 1502 ntBASIC22.67■■□□□ 1.22
SMARCC2Q8TAQ2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
SMARCC2Q8TAQ2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SMARCC2Q8TAQ2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC22.67■■□□□ 1.22
SMARCC2Q8TAQ2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
SMARCC2Q8TAQ2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SMARCC2Q8TAQ2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SMARCC2Q8TAQ2 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SMARCC2Q8TAQ2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC22.67■■□□□ 1.22
SMARCC2Q8TAQ2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SMARCC2Q8TAQ2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC22.67■■□□□ 1.22
SMARCC2Q8TAQ2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
SMARCC2Q8TAQ2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
SMARCC2Q8TAQ2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms