Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CCDC89Q8N998 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CCDC89Q8N998 TFP1-202ENST00000475455 1573 ntBASIC20.08■□□□□ 0.81
CCDC89Q8N998 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC89Q8N998 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC89Q8N998 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC89Q8N998 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CCDC89Q8N998 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.08■□□□□ 0.81
CCDC89Q8N998 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC89Q8N998 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.08■□□□□ 0.81
CCDC89Q8N998 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.08■□□□□ 0.81
CCDC89Q8N998 AC073210.2-201ENST00000430369 194 ntBASIC20.08■□□□□ 0.81
CCDC89Q8N998 CROCCP5-201ENST00000436658 830 ntBASIC20.08■□□□□ 0.81
CCDC89Q8N998 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC89Q8N998 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC89Q8N998 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.08■□□□□ 0.81
CCDC89Q8N998 AL138781.2-201ENST00000617896 1843 ntBASIC20.08■□□□□ 0.8
CCDC89Q8N998 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
CCDC89Q8N998 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
CCDC89Q8N998 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.08■□□□□ 0.8
CCDC89Q8N998 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.8
CCDC89Q8N998 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC89Q8N998 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
CCDC89Q8N998 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC89Q8N998 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.08■□□□□ 0.8
CCDC89Q8N998 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CCDC89Q8N998 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC89Q8N998 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CCDC89Q8N998 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CCDC89Q8N998 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC89Q8N998 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC89Q8N998 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CCDC89Q8N998 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
CCDC89Q8N998 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC89Q8N998 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC89Q8N998 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC89Q8N998 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
CCDC89Q8N998 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC89Q8N998 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC89Q8N998 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC89Q8N998 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC89Q8N998 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC89Q8N998 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC89Q8N998 MIPEPP3-201ENST00000412105 444 ntBASIC20.07■□□□□ 0.8
CCDC89Q8N998 DUSP5P2-201ENST00000426873 1033 ntBASIC20.07■□□□□ 0.8
CCDC89Q8N998 AC006970.2-201ENST00000450065 779 ntBASIC20.07■□□□□ 0.8
CCDC89Q8N998 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC89Q8N998 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC89Q8N998 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CCDC89Q8N998 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC89Q8N998 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC89Q8N998 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CCDC89Q8N998 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC89Q8N998 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC89Q8N998 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC89Q8N998 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC89Q8N998 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC89Q8N998 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC89Q8N998 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC89Q8N998 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC89Q8N998 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC89Q8N998 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CCDC89Q8N998 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
CCDC89Q8N998 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC89Q8N998 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CCDC89Q8N998 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC89Q8N998 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC89Q8N998 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC89Q8N998 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC89Q8N998 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC89Q8N998 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC89Q8N998 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CCDC89Q8N998 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CCDC89Q8N998 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CCDC89Q8N998 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CCDC89Q8N998 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC89Q8N998 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC89Q8N998 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CCDC89Q8N998 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC89Q8N998 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC89Q8N998 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CCDC89Q8N998 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC89Q8N998 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC89Q8N998 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC89Q8N998 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC89Q8N998 RAP2CP1-201ENST00000605103 478 ntBASIC20.06■□□□□ 0.8
CCDC89Q8N998 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
CCDC89Q8N998 AL121832.2-201ENST00000610979 668 ntBASIC20.06■□□□□ 0.8
CCDC89Q8N998 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC89Q8N998 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.06■□□□□ 0.8
CCDC89Q8N998 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC89Q8N998 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC89Q8N998 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC89Q8N998 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC89Q8N998 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CCDC89Q8N998 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC89Q8N998 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CCDC89Q8N998 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC89Q8N998 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CCDC89Q8N998 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms