Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TTC9CQ8N5M4 Z82202.1-201ENST00000623446 1880 ntBASIC15.31■□□□□ 0.04
TTC9CQ8N5M4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9CQ8N5M4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9CQ8N5M4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TTC9CQ8N5M4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9CQ8N5M4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TTC9CQ8N5M4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.31■□□□□ 0.04
TTC9CQ8N5M4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9CQ8N5M4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
TTC9CQ8N5M4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9CQ8N5M4 AC069544.1-201ENST00000609399 999 ntBASIC15.31■□□□□ 0.04
TTC9CQ8N5M4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9CQ8N5M4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TTC9CQ8N5M4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.31■□□□□ 0.04
TTC9CQ8N5M4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9CQ8N5M4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.31■□□□□ 0.04
TTC9CQ8N5M4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.31■□□□□ 0.04
TTC9CQ8N5M4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9CQ8N5M4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.31■□□□□ 0.04
TTC9CQ8N5M4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
TTC9CQ8N5M4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9CQ8N5M4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC9CQ8N5M4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC15.31■□□□□ 0.04
TTC9CQ8N5M4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 ESRRAP1-201ENST00000400596 1257 ntBASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 ZNF815P-204ENST00000434898 1737 ntBASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 MTDHP1-201ENST00000605323 784 ntBASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.3■□□□□ 0.04
TTC9CQ8N5M4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 NBPF21P-201ENST00000425093 1451 ntBASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 AC004264.1-201ENST00000608354 794 ntBASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9CQ8N5M4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms