Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CRLF3Q8IUI8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CRLF3Q8IUI8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
CRLF3Q8IUI8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CRLF3Q8IUI8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CRLF3Q8IUI8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CRLF3Q8IUI8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CRLF3Q8IUI8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CRLF3Q8IUI8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
CRLF3Q8IUI8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CRLF3Q8IUI8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.33■□□□□ 0.69
CRLF3Q8IUI8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.33■□□□□ 0.69
CRLF3Q8IUI8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CRLF3Q8IUI8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CRLF3Q8IUI8 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.33■□□□□ 0.68
CRLF3Q8IUI8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.33■□□□□ 0.68
CRLF3Q8IUI8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CRLF3Q8IUI8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CRLF3Q8IUI8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CRLF3Q8IUI8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CRLF3Q8IUI8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CRLF3Q8IUI8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CRLF3Q8IUI8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CRLF3Q8IUI8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CRLF3Q8IUI8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CRLF3Q8IUI8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CRLF3Q8IUI8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CRLF3Q8IUI8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CRLF3Q8IUI8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.32■□□□□ 0.68
CRLF3Q8IUI8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.32■□□□□ 0.68
CRLF3Q8IUI8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CRLF3Q8IUI8 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CRLF3Q8IUI8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CRLF3Q8IUI8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.32■□□□□ 0.68
CRLF3Q8IUI8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.32■□□□□ 0.68
CRLF3Q8IUI8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.32■□□□□ 0.68
CRLF3Q8IUI8 AC069236.1-201ENST00000604339 616 ntBASIC19.32■□□□□ 0.68
CRLF3Q8IUI8 AC016405.3-201ENST00000607710 860 ntBASIC19.32■□□□□ 0.68
CRLF3Q8IUI8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.32■□□□□ 0.68
CRLF3Q8IUI8 OR10C1-204ENST00000622521 1039 ntBASIC19.32■□□□□ 0.68
CRLF3Q8IUI8 AC008694.1-202ENST00000636953 945 ntBASIC19.32■□□□□ 0.68
CRLF3Q8IUI8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CRLF3Q8IUI8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CRLF3Q8IUI8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CRLF3Q8IUI8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.32■□□□□ 0.68
CRLF3Q8IUI8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.32■□□□□ 0.68
CRLF3Q8IUI8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CRLF3Q8IUI8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CRLF3Q8IUI8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CRLF3Q8IUI8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CRLF3Q8IUI8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CRLF3Q8IUI8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
CRLF3Q8IUI8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CRLF3Q8IUI8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.31■□□□□ 0.68
CRLF3Q8IUI8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CRLF3Q8IUI8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CRLF3Q8IUI8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CRLF3Q8IUI8 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CRLF3Q8IUI8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.31■□□□□ 0.68
CRLF3Q8IUI8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.31■□□□□ 0.68
CRLF3Q8IUI8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CRLF3Q8IUI8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CRLF3Q8IUI8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CRLF3Q8IUI8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CRLF3Q8IUI8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CRLF3Q8IUI8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
CRLF3Q8IUI8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CRLF3Q8IUI8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CRLF3Q8IUI8 AC005082.1-201ENST00000413042 2259 ntBASIC19.31■□□□□ 0.68
CRLF3Q8IUI8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.31■□□□□ 0.68
CRLF3Q8IUI8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
CRLF3Q8IUI8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CRLF3Q8IUI8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 AC007613.1-201ENST00000572811 2597 ntBASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 AL591742.1-201ENST00000604433 565 ntBASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CRLF3Q8IUI8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms