Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF546Q86UE3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF546Q86UE3 AC131281.2-201ENST00000520478 145 ntBASIC16.1■□□□□ 0.17
ZNF546Q86UE3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.1■□□□□ 0.17
ZNF546Q86UE3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.1■□□□□ 0.17
ZNF546Q86UE3 AC105233.4-201ENST00000642045 216 ntBASIC16.1■□□□□ 0.17
ZNF546Q86UE3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.1■□□□□ 0.17
ZNF546Q86UE3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF546Q86UE3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF546Q86UE3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF546Q86UE3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF546Q86UE3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF546Q86UE3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.1■□□□□ 0.17
ZNF546Q86UE3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
ZNF546Q86UE3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF546Q86UE3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF546Q86UE3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF546Q86UE3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ZNF546Q86UE3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF546Q86UE3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF546Q86UE3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF546Q86UE3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF546Q86UE3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF546Q86UE3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF546Q86UE3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
ZNF546Q86UE3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF546Q86UE3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF546Q86UE3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
ZNF546Q86UE3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF546Q86UE3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF546Q86UE3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.09■□□□□ 0.17
ZNF546Q86UE3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.09■□□□□ 0.17
ZNF546Q86UE3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF546Q86UE3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF546Q86UE3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
ZNF546Q86UE3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
ZNF546Q86UE3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.09■□□□□ 0.17
ZNF546Q86UE3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.09■□□□□ 0.17
ZNF546Q86UE3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF546Q86UE3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ZNF546Q86UE3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ZNF546Q86UE3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF546Q86UE3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF546Q86UE3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
ZNF546Q86UE3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF546Q86UE3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.08■□□□□ 0.17
ZNF546Q86UE3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ZNF546Q86UE3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF546Q86UE3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF546Q86UE3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.08■□□□□ 0.16
ZNF546Q86UE3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.08■□□□□ 0.16
ZNF546Q86UE3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.08■□□□□ 0.16
ZNF546Q86UE3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.08■□□□□ 0.16
ZNF546Q86UE3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF546Q86UE3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF546Q86UE3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
ZNF546Q86UE3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF546Q86UE3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF546Q86UE3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF546Q86UE3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF546Q86UE3 AC093525.10-201ENST00000625130 1569 ntBASIC16.08■□□□□ 0.16
ZNF546Q86UE3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF546Q86UE3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.08■□□□□ 0.16
ZNF546Q86UE3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ZNF546Q86UE3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 POU5F1P4-201ENST00000413175 1085 ntBASIC16.07■□□□□ 0.16
ZNF546Q86UE3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 AC099398.1-201ENST00000567919 2776 ntBASIC16.07■□□□□ 0.16
ZNF546Q86UE3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms