Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
VPS13BQ7Z7G8 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC12□□□□□ -0.49
VPS13BQ7Z7G8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12□□□□□ -0.49
VPS13BQ7Z7G8 RNA5SP419-201ENST00000515908 135 ntBASIC12□□□□□ -0.49
VPS13BQ7Z7G8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
VPS13BQ7Z7G8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
VPS13BQ7Z7G8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
VPS13BQ7Z7G8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC12□□□□□ -0.49
VPS13BQ7Z7G8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VPS13BQ7Z7G8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC12□□□□□ -0.49
VPS13BQ7Z7G8 ATP5G2P1-201ENST00000433580 426 ntBASIC12□□□□□ -0.49
VPS13BQ7Z7G8 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC12□□□□□ -0.49
VPS13BQ7Z7G8 AC141257.4-201ENST00000634557 245 ntBASIC12□□□□□ -0.49
VPS13BQ7Z7G8 AC136944.6-201ENST00000634818 245 ntBASIC12□□□□□ -0.49
VPS13BQ7Z7G8 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
VPS13BQ7Z7G8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VPS13BQ7Z7G8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC12□□□□□ -0.49
VPS13BQ7Z7G8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VPS13BQ7Z7G8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC12□□□□□ -0.49
VPS13BQ7Z7G8 AC111152.3-201ENST00000569699 673 ntBASIC12□□□□□ -0.49
VPS13BQ7Z7G8 AC011298.2-201ENST00000617989 482 ntBASIC12□□□□□ -0.49
VPS13BQ7Z7G8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC12□□□□□ -0.49
VPS13BQ7Z7G8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 AC073314.1-201ENST00000568729 2216 ntBASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 AP005212.1-201ENST00000581547 1997 ntBASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 AC131212.4-201ENST00000623606 975 ntBASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 PPIH-202ENST00000372549 327 ntTSL 3 BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 AP000523.1-201ENST00000398242 1049 ntBASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 DAP-202ENST00000432074 1048 ntTSL 2 BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 AC092667.1-201ENST00000434301 2586 ntBASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
VPS13BQ7Z7G8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 TMEM179-206ENST00000616017 1645 ntBASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 KRT8P41-201ENST00000533985 1514 ntBASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 NEK4P2-201ENST00000580004 1012 ntBASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 AC092597.1-201ENST00000487352 616 ntBASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 SDHD-206ENST00000528182 754 ntTSL 3 BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 AP001271.2-201ENST00000624018 1556 ntBASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC11.98□□□□□ -0.49
VPS13BQ7Z7G8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VPS13BQ7Z7G8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms