Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAI1Q7Z5J4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RAI1Q7Z5J4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RAI1Q7Z5J4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.58■□□□□ 0.24
RAI1Q7Z5J4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
RAI1Q7Z5J4 CCR12P-201ENST00000446203 998 ntBASIC16.58■□□□□ 0.24
RAI1Q7Z5J4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RAI1Q7Z5J4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.58■□□□□ 0.24
RAI1Q7Z5J4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.58■□□□□ 0.24
RAI1Q7Z5J4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.58■□□□□ 0.24
RAI1Q7Z5J4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAI1Q7Z5J4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAI1Q7Z5J4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.58■□□□□ 0.24
RAI1Q7Z5J4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAI1Q7Z5J4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.58■□□□□ 0.24
RAI1Q7Z5J4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAI1Q7Z5J4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAI1Q7Z5J4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAI1Q7Z5J4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.57■□□□□ 0.24
RAI1Q7Z5J4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RAI1Q7Z5J4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RAI1Q7Z5J4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAI1Q7Z5J4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAI1Q7Z5J4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAI1Q7Z5J4 CA15P1-201ENST00000481698 905 ntBASIC16.57■□□□□ 0.24
RAI1Q7Z5J4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.57■□□□□ 0.24
RAI1Q7Z5J4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.57■□□□□ 0.24
RAI1Q7Z5J4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.57■□□□□ 0.24
RAI1Q7Z5J4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAI1Q7Z5J4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAI1Q7Z5J4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.57■□□□□ 0.24
RAI1Q7Z5J4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAI1Q7Z5J4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAI1Q7Z5J4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAI1Q7Z5J4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAI1Q7Z5J4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAI1Q7Z5J4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAI1Q7Z5J4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
RAI1Q7Z5J4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.57■□□□□ 0.24
RAI1Q7Z5J4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.57■□□□□ 0.24
RAI1Q7Z5J4 AC008040.2-201ENST00000461049 708 ntBASIC16.57■□□□□ 0.24
RAI1Q7Z5J4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAI1Q7Z5J4 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.56■□□□□ 0.24
RAI1Q7Z5J4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAI1Q7Z5J4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAI1Q7Z5J4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RAI1Q7Z5J4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAI1Q7Z5J4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAI1Q7Z5J4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAI1Q7Z5J4 TSPY17P-201ENST00000450329 467 ntBASIC16.56■□□□□ 0.24
RAI1Q7Z5J4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAI1Q7Z5J4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.56■□□□□ 0.24
RAI1Q7Z5J4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RAI1Q7Z5J4 AL358472.4-201ENST00000633140 710 ntBASIC16.56■□□□□ 0.24
RAI1Q7Z5J4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.56■□□□□ 0.24
RAI1Q7Z5J4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.56■□□□□ 0.24
RAI1Q7Z5J4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.56■□□□□ 0.24
RAI1Q7Z5J4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAI1Q7Z5J4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAI1Q7Z5J4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.56■□□□□ 0.24
RAI1Q7Z5J4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAI1Q7Z5J4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.56■□□□□ 0.24
RAI1Q7Z5J4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
RAI1Q7Z5J4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAI1Q7Z5J4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAI1Q7Z5J4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAI1Q7Z5J4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.55■□□□□ 0.24
RAI1Q7Z5J4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.55■□□□□ 0.24
RAI1Q7Z5J4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.55■□□□□ 0.24
RAI1Q7Z5J4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.55■□□□□ 0.24
RAI1Q7Z5J4 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.55■□□□□ 0.24
RAI1Q7Z5J4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.55■□□□□ 0.24
RAI1Q7Z5J4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.55■□□□□ 0.24
RAI1Q7Z5J4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.55■□□□□ 0.24
RAI1Q7Z5J4 AC008622.2-201ENST00000617006 1229 ntBASIC16.55■□□□□ 0.24
RAI1Q7Z5J4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RAI1Q7Z5J4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAI1Q7Z5J4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RAI1Q7Z5J4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAI1Q7Z5J4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAI1Q7Z5J4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RAI1Q7Z5J4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAI1Q7Z5J4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAI1Q7Z5J4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAI1Q7Z5J4 UPK3BP1-201ENST00000428678 509 ntBASIC16.55■□□□□ 0.24
RAI1Q7Z5J4 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.55■□□□□ 0.24
RAI1Q7Z5J4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.55■□□□□ 0.24
RAI1Q7Z5J4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.55■□□□□ 0.24
RAI1Q7Z5J4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.55■□□□□ 0.24
RAI1Q7Z5J4 AL023803.3-201ENST00000615559 522 ntBASIC16.55■□□□□ 0.24
RAI1Q7Z5J4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAI1Q7Z5J4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RAI1Q7Z5J4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAI1Q7Z5J4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RAI1Q7Z5J4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAI1Q7Z5J4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
RAI1Q7Z5J4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RAI1Q7Z5J4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAI1Q7Z5J4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.54■□□□□ 0.24
RAI1Q7Z5J4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms