Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 EEF1DP3-203ENST00000566025 782 ntBASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 KRT8P36-201ENST00000489121 1440 ntBASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 AC093525.10-201ENST00000625130 1569 ntBASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LINC00173Q6ZV60 ABALON-201ENST00000629058 1903 ntBASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 AC053503.5-201ENST00000601508 636 ntBASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC00173Q6ZV60 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00173Q6ZV60 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00173Q6ZV60 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00173Q6ZV60 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00173Q6ZV60 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00173Q6ZV60 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00173Q6ZV60 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00173Q6ZV60 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00173Q6ZV60 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.16
LINC00173Q6ZV60 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00173Q6ZV60 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00173Q6ZV60 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00173Q6ZV60 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00173Q6ZV60 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00173Q6ZV60 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00173Q6ZV60 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LINC00173Q6ZV60 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LINC00173Q6ZV60 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LINC00173Q6ZV60 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00173Q6ZV60 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
LINC00173Q6ZV60 BX842568.3-201ENST00000418104 571 ntBASIC14.02□□□□□ -0.17
LINC00173Q6ZV60 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00173Q6ZV60 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC14.02□□□□□ -0.17
LINC00173Q6ZV60 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00173Q6ZV60 RARRES2P11-201ENST00000635158 484 ntBASIC14.02□□□□□ -0.17
LINC00173Q6ZV60 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
LINC00173Q6ZV60 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00173Q6ZV60 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00173Q6ZV60 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
LINC00173Q6ZV60 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
LINC00173Q6ZV60 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC00173Q6ZV60 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00173Q6ZV60 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00173Q6ZV60 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00173Q6ZV60 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.02□□□□□ -0.17
LINC00173Q6ZV60 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00173Q6ZV60 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00173Q6ZV60 AC008764.6-201ENST00000595909 2069 ntBASIC14.02□□□□□ -0.17
LINC00173Q6ZV60 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.02□□□□□ -0.17
LINC00173Q6ZV60 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC00173Q6ZV60 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00173Q6ZV60 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms