Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00575Q6W349 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC00575Q6W349 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00575Q6W349 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC12.29□□□□□ -0.44
LINC00575Q6W349 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC12.29□□□□□ -0.44
LINC00575Q6W349 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC00575Q6W349 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00575Q6W349 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00575Q6W349 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00575Q6W349 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00575Q6W349 MIR572-201ENST00000384983 95 ntBASIC12.29□□□□□ -0.44
LINC00575Q6W349 GRAMD4P2-201ENST00000423297 1097 ntBASIC12.29□□□□□ -0.44
LINC00575Q6W349 AC097381.1-201ENST00000429019 1296 ntBASIC12.29□□□□□ -0.44
LINC00575Q6W349 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC12.29□□□□□ -0.44
LINC00575Q6W349 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00575Q6W349 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC00575Q6W349 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00575Q6W349 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
LINC00575Q6W349 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00575Q6W349 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00575Q6W349 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC00575Q6W349 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00575Q6W349 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
LINC00575Q6W349 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00575Q6W349 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00575Q6W349 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00575Q6W349 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00575Q6W349 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00575Q6W349 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LINC00575Q6W349 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00575Q6W349 USP39-202ENST00000409025 1946 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC00575Q6W349 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LINC00575Q6W349 TEX21P-204ENST00000641479 1693 ntBASIC12.29□□□□□ -0.44
LINC00575Q6W349 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00575Q6W349 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC00575Q6W349 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00575Q6W349 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LINC00575Q6W349 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00575Q6W349 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LINC00575Q6W349 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LINC00575Q6W349 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 MKRN4P-201ENST00000444706 1521 ntBASIC12.28□□□□□ -0.44
LINC00575Q6W349 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
LINC00575Q6W349 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
LINC00575Q6W349 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
LINC00575Q6W349 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
LINC00575Q6W349 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00575Q6W349 CDV3P1-201ENST00000471403 739 ntBASIC12.28□□□□□ -0.44
LINC00575Q6W349 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC00575Q6W349 SLC7A5P2-201ENST00000553010 536 ntBASIC12.28□□□□□ -0.44
LINC00575Q6W349 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC12.28□□□□□ -0.44
LINC00575Q6W349 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00575Q6W349 AL031963.3-201ENST00000606441 850 ntBASIC12.28□□□□□ -0.44
LINC00575Q6W349 AL355001.2-201ENST00000620617 1191 ntBASIC12.28□□□□□ -0.44
LINC00575Q6W349 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
LINC00575Q6W349 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
LINC00575Q6W349 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
LINC00575Q6W349 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC12.28□□□□□ -0.44
LINC00575Q6W349 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00575Q6W349 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00575Q6W349 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LINC00575Q6W349 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
LINC00575Q6W349 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC12.27□□□□□ -0.44
LINC00575Q6W349 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC12.27□□□□□ -0.44
LINC00575Q6W349 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.44
LINC00575Q6W349 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC12.27□□□□□ -0.44
LINC00575Q6W349 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00575Q6W349 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00575Q6W349 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00575Q6W349 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00575Q6W349 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00575Q6W349 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
LINC00575Q6W349 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00575Q6W349 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms