Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTCRAQ6ISU1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.02■□□□□ 0.79
PTCRAQ6ISU1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
PTCRAQ6ISU1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.02■□□□□ 0.79
PTCRAQ6ISU1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
PTCRAQ6ISU1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTCRAQ6ISU1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTCRAQ6ISU1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PTCRAQ6ISU1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.01■□□□□ 0.79
PTCRAQ6ISU1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.01■□□□□ 0.79
PTCRAQ6ISU1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.01■□□□□ 0.79
PTCRAQ6ISU1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTCRAQ6ISU1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.01■□□□□ 0.79
PTCRAQ6ISU1 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.01■□□□□ 0.79
PTCRAQ6ISU1 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTCRAQ6ISU1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.01■□□□□ 0.79
PTCRAQ6ISU1 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTCRAQ6ISU1 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.01■□□□□ 0.79
PTCRAQ6ISU1 AP000867.3-201ENST00000524675 377 ntBASIC20.01■□□□□ 0.79
PTCRAQ6ISU1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.01■□□□□ 0.79
PTCRAQ6ISU1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.01■□□□□ 0.79
PTCRAQ6ISU1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTCRAQ6ISU1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.01■□□□□ 0.79
PTCRAQ6ISU1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.01■□□□□ 0.79
PTCRAQ6ISU1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTCRAQ6ISU1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.01■□□□□ 0.79
PTCRAQ6ISU1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.01■□□□□ 0.79
PTCRAQ6ISU1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTCRAQ6ISU1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTCRAQ6ISU1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTCRAQ6ISU1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
PTCRAQ6ISU1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20■□□□□ 0.79
PTCRAQ6ISU1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20■□□□□ 0.79
PTCRAQ6ISU1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20■□□□□ 0.79
PTCRAQ6ISU1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTCRAQ6ISU1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PTCRAQ6ISU1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20■□□□□ 0.79
PTCRAQ6ISU1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20■□□□□ 0.79
PTCRAQ6ISU1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTCRAQ6ISU1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTCRAQ6ISU1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20■□□□□ 0.79
PTCRAQ6ISU1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20■□□□□ 0.79
PTCRAQ6ISU1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20■□□□□ 0.79
PTCRAQ6ISU1 FOSL1P1-201ENST00000511041 816 ntBASIC20■□□□□ 0.79
PTCRAQ6ISU1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20■□□□□ 0.79
PTCRAQ6ISU1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTCRAQ6ISU1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20■□□□□ 0.79
PTCRAQ6ISU1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20■□□□□ 0.79
PTCRAQ6ISU1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PTCRAQ6ISU1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20■□□□□ 0.79
PTCRAQ6ISU1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20■□□□□ 0.79
PTCRAQ6ISU1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
PTCRAQ6ISU1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20■□□□□ 0.79
PTCRAQ6ISU1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTCRAQ6ISU1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTCRAQ6ISU1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTCRAQ6ISU1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTCRAQ6ISU1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTCRAQ6ISU1 Z98882.1-201ENST00000622160 2253 ntBASIC19.99■□□□□ 0.79
PTCRAQ6ISU1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTCRAQ6ISU1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.99■□□□□ 0.79
PTCRAQ6ISU1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.99■□□□□ 0.79
PTCRAQ6ISU1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.99■□□□□ 0.79
PTCRAQ6ISU1 KRT18P31-201ENST00000506277 1292 ntBASIC19.99■□□□□ 0.79
PTCRAQ6ISU1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.99■□□□□ 0.79
PTCRAQ6ISU1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTCRAQ6ISU1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.99■□□□□ 0.79
PTCRAQ6ISU1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTCRAQ6ISU1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTCRAQ6ISU1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PTCRAQ6ISU1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.99■□□□□ 0.79
PTCRAQ6ISU1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTCRAQ6ISU1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.98■□□□□ 0.79
PTCRAQ6ISU1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PTCRAQ6ISU1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PTCRAQ6ISU1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.98■□□□□ 0.79
PTCRAQ6ISU1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTCRAQ6ISU1 GUSBP5-202ENST00000510805 1989 ntBASIC19.98■□□□□ 0.79
PTCRAQ6ISU1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
PTCRAQ6ISU1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTCRAQ6ISU1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.98■□□□□ 0.79
PTCRAQ6ISU1 MRPL3P1-201ENST00000400109 1033 ntBASIC19.98■□□□□ 0.79
PTCRAQ6ISU1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.98■□□□□ 0.79
PTCRAQ6ISU1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PTCRAQ6ISU1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.98■□□□□ 0.79
PTCRAQ6ISU1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.98■□□□□ 0.79
PTCRAQ6ISU1 MIR4674-201ENST00000582457 87 ntBASIC19.98■□□□□ 0.79
PTCRAQ6ISU1 BX640515.1-201ENST00000617215 977 ntBASIC19.98■□□□□ 0.79
PTCRAQ6ISU1 AL024507.2-201ENST00000606070 2574 ntBASIC19.98■□□□□ 0.79
PTCRAQ6ISU1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTCRAQ6ISU1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms