Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
SNAPC4Q5SXM2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
SNAPC4Q5SXM2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
SNAPC4Q5SXM2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SNAPC4Q5SXM2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SNAPC4Q5SXM2 CHCHD2P8-201ENST00000429873 447 ntBASIC31.79■■■□□ 2.68
SNAPC4Q5SXM2 AC139530.3-201ENST00000620344 690 ntBASIC31.79■■■□□ 2.68
SNAPC4Q5SXM2 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SNAPC4Q5SXM2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
SNAPC4Q5SXM2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SNAPC4Q5SXM2 FP700111.2-201ENST00000619190 1892 ntBASIC31.79■■■□□ 2.68
SNAPC4Q5SXM2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SNAPC4Q5SXM2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC31.78■■■□□ 2.68
SNAPC4Q5SXM2 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
SNAPC4Q5SXM2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC31.78■■■□□ 2.68
SNAPC4Q5SXM2 MPI-205ENST00000562606 1052 ntTSL 3 BASIC31.78■■■□□ 2.68
SNAPC4Q5SXM2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC31.78■■■□□ 2.68
SNAPC4Q5SXM2 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
SNAPC4Q5SXM2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
SNAPC4Q5SXM2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC31.78■■■□□ 2.68
SNAPC4Q5SXM2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SNAPC4Q5SXM2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC31.78■■■□□ 2.68
SNAPC4Q5SXM2 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
SNAPC4Q5SXM2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SNAPC4Q5SXM2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC31.78■■■□□ 2.68
SNAPC4Q5SXM2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
SNAPC4Q5SXM2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
SNAPC4Q5SXM2 MRPL3P1-201ENST00000400109 1033 ntBASIC31.78■■■□□ 2.68
SNAPC4Q5SXM2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
SNAPC4Q5SXM2 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC31.78■■■□□ 2.68
SNAPC4Q5SXM2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
SNAPC4Q5SXM2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC31.78■■■□□ 2.68
SNAPC4Q5SXM2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
SNAPC4Q5SXM2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SNAPC4Q5SXM2 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SNAPC4Q5SXM2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SNAPC4Q5SXM2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
SNAPC4Q5SXM2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC31.77■■■□□ 2.68
SNAPC4Q5SXM2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC31.77■■■□□ 2.68
SNAPC4Q5SXM2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC31.77■■■□□ 2.68
SNAPC4Q5SXM2 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC31.77■■■□□ 2.68
SNAPC4Q5SXM2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC31.77■■■□□ 2.68
SNAPC4Q5SXM2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC31.77■■■□□ 2.68
SNAPC4Q5SXM2 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC31.77■■■□□ 2.68
SNAPC4Q5SXM2 AC034232.1-201ENST00000506026 1064 ntBASIC31.77■■■□□ 2.68
SNAPC4Q5SXM2 KRT8P26-201ENST00000534154 1276 ntBASIC31.77■■■□□ 2.68
SNAPC4Q5SXM2 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC31.77■■■□□ 2.68
SNAPC4Q5SXM2 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SNAPC4Q5SXM2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SNAPC4Q5SXM2 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC31.76■■■□□ 2.68
SNAPC4Q5SXM2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC31.76■■■□□ 2.68
SNAPC4Q5SXM2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
SNAPC4Q5SXM2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC31.76■■■□□ 2.67
SNAPC4Q5SXM2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SNAPC4Q5SXM2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SNAPC4Q5SXM2 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SNAPC4Q5SXM2 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
SNAPC4Q5SXM2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC31.76■■■□□ 2.67
SNAPC4Q5SXM2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC31.76■■■□□ 2.67
SNAPC4Q5SXM2 BMF-207ENST00000559701 630 ntTSL 3 BASIC31.76■■■□□ 2.67
SNAPC4Q5SXM2 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
SNAPC4Q5SXM2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC31.76■■■□□ 2.67
SNAPC4Q5SXM2 AC012676.1-201ENST00000574705 1949 ntBASIC31.76■■■□□ 2.67
SNAPC4Q5SXM2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
SNAPC4Q5SXM2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC31.76■■■□□ 2.67
SNAPC4Q5SXM2 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC31.76■■■□□ 2.67
SNAPC4Q5SXM2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
SNAPC4Q5SXM2 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SNAPC4Q5SXM2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SNAPC4Q5SXM2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC31.75■■■□□ 2.67
SNAPC4Q5SXM2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
SNAPC4Q5SXM2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
SNAPC4Q5SXM2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SNAPC4Q5SXM2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC31.75■■■□□ 2.67
SNAPC4Q5SXM2 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SNAPC4Q5SXM2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC31.75■■■□□ 2.67
SNAPC4Q5SXM2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC31.75■■■□□ 2.67
SNAPC4Q5SXM2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC31.75■■■□□ 2.67
SNAPC4Q5SXM2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC31.75■■■□□ 2.67
SNAPC4Q5SXM2 AC120114.3-201ENST00000611923 658 ntBASIC31.75■■■□□ 2.67
SNAPC4Q5SXM2 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SNAPC4Q5SXM2 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SNAPC4Q5SXM2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC31.75■■■□□ 2.67
SNAPC4Q5SXM2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SNAPC4Q5SXM2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SNAPC4Q5SXM2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC31.75■■■□□ 2.67
SNAPC4Q5SXM2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
SNAPC4Q5SXM2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC31.75■■■□□ 2.67
SNAPC4Q5SXM2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SNAPC4Q5SXM2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
SNAPC4Q5SXM2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
SNAPC4Q5SXM2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SNAPC4Q5SXM2 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC31.74■■■□□ 2.67
SNAPC4Q5SXM2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
SNAPC4Q5SXM2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC31.74■■■□□ 2.67
SNAPC4Q5SXM2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
SNAPC4Q5SXM2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC31.74■■■□□ 2.67
SNAPC4Q5SXM2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
SNAPC4Q5SXM2 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC31.74■■■□□ 2.67
SNAPC4Q5SXM2 AL162741.1-201ENST00000565563 1558 ntBASIC31.74■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms