Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.87■□□□□ 0.29
LRRK2Q5S007 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRK2Q5S007 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRK2Q5S007 MIR662-201ENST00000384847 95 ntBASIC16.87■□□□□ 0.29
LRRK2Q5S007 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRRK2Q5S007 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRRK2Q5S007 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.87■□□□□ 0.29
LRRK2Q5S007 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.87■□□□□ 0.29
LRRK2Q5S007 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.87■□□□□ 0.29
LRRK2Q5S007 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.87■□□□□ 0.29
LRRK2Q5S007 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRK2Q5S007 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.86■□□□□ 0.29
LRRK2Q5S007 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRRK2Q5S007 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRK2Q5S007 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.86■□□□□ 0.29
LRRK2Q5S007 AC005229.4-201ENST00000610085 2198 ntBASIC16.86■□□□□ 0.29
LRRK2Q5S007 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRRK2Q5S007 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.86■□□□□ 0.29
LRRK2Q5S007 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.86■□□□□ 0.29
LRRK2Q5S007 AC138894.3-201ENST00000603787 634 ntBASIC16.86■□□□□ 0.29
LRRK2Q5S007 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.86■□□□□ 0.29
LRRK2Q5S007 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRRK2Q5S007 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.86■□□□□ 0.29
LRRK2Q5S007 AC243591.1-201ENST00000452967 1364 ntBASIC16.86■□□□□ 0.29
LRRK2Q5S007 PMS2P7-201ENST00000506558 1336 ntBASIC16.86■□□□□ 0.29
LRRK2Q5S007 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRK2Q5S007 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRRK2Q5S007 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
LRRK2Q5S007 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.86■□□□□ 0.29
LRRK2Q5S007 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.85■□□□□ 0.29
LRRK2Q5S007 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.85■□□□□ 0.29
LRRK2Q5S007 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
LRRK2Q5S007 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRK2Q5S007 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
LRRK2Q5S007 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRK2Q5S007 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRK2Q5S007 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.85■□□□□ 0.29
LRRK2Q5S007 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRK2Q5S007 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRK2Q5S007 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
LRRK2Q5S007 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRK2Q5S007 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
LRRK2Q5S007 SAPCD2P3-201ENST00000455031 850 ntBASIC16.85■□□□□ 0.29
LRRK2Q5S007 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.85■□□□□ 0.29
LRRK2Q5S007 AL691403.2-201ENST00000618460 490 ntBASIC16.85■□□□□ 0.29
LRRK2Q5S007 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRK2Q5S007 AIRN-201ENST00000601203 4374 ntBASIC16.85■□□□□ 0.29
LRRK2Q5S007 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.85■□□□□ 0.29
LRRK2Q5S007 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRK2Q5S007 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.85■□□□□ 0.29
LRRK2Q5S007 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRK2Q5S007 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRK2Q5S007 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.85■□□□□ 0.29
LRRK2Q5S007 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRK2Q5S007 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRK2Q5S007 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRK2Q5S007 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.85■□□□□ 0.29
LRRK2Q5S007 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.85■□□□□ 0.29
LRRK2Q5S007 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.85■□□□□ 0.29
LRRK2Q5S007 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.85■□□□□ 0.29
LRRK2Q5S007 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRK2Q5S007 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.85■□□□□ 0.29
LRRK2Q5S007 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRK2Q5S007 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.84■□□□□ 0.29
LRRK2Q5S007 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRK2Q5S007 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRK2Q5S007 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.84■□□□□ 0.29
LRRK2Q5S007 FOSL1P1-201ENST00000511041 816 ntBASIC16.84■□□□□ 0.29
LRRK2Q5S007 AC027601.4-201ENST00000611259 610 ntBASIC16.84■□□□□ 0.29
LRRK2Q5S007 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRK2Q5S007 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRK2Q5S007 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRK2Q5S007 AC242852.2-201ENST00000615738 1807 ntBASIC16.84■□□□□ 0.29
LRRK2Q5S007 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.84■□□□□ 0.29
LRRK2Q5S007 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRK2Q5S007 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.84■□□□□ 0.29
LRRK2Q5S007 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRK2Q5S007 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.84■□□□□ 0.29
LRRK2Q5S007 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.84■□□□□ 0.29
LRRK2Q5S007 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRK2Q5S007 AC055717.3-201ENST00000622967 595 ntBASIC16.84■□□□□ 0.29
LRRK2Q5S007 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.83■□□□□ 0.29
LRRK2Q5S007 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LRRK2Q5S007 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LRRK2Q5S007 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
LRRK2Q5S007 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
LRRK2Q5S007 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.83■□□□□ 0.28
LRRK2Q5S007 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRRK2Q5S007 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.83■□□□□ 0.28
LRRK2Q5S007 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.83■□□□□ 0.28
LRRK2Q5S007 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.83■□□□□ 0.28
LRRK2Q5S007 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.83■□□□□ 0.28
LRRK2Q5S007 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.83■□□□□ 0.28
LRRK2Q5S007 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.83■□□□□ 0.28
LRRK2Q5S007 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.83■□□□□ 0.28
LRRK2Q5S007 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.83■□□□□ 0.28
LRRK2Q5S007 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.83■□□□□ 0.28
LRRK2Q5S007 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.83■□□□□ 0.28
LRRK2Q5S007 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LRRK2Q5S007 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms