Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
USH1GQ495M9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
USH1GQ495M9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
USH1GQ495M9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
USH1GQ495M9 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC22.28■■□□□ 1.16
USH1GQ495M9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
USH1GQ495M9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
USH1GQ495M9 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
USH1GQ495M9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC22.28■■□□□ 1.16
USH1GQ495M9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC22.28■■□□□ 1.16
USH1GQ495M9 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC22.28■■□□□ 1.16
USH1GQ495M9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC22.28■■□□□ 1.16
USH1GQ495M9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
USH1GQ495M9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
USH1GQ495M9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
USH1GQ495M9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
USH1GQ495M9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
USH1GQ495M9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
USH1GQ495M9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC22.28■■□□□ 1.16
USH1GQ495M9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
USH1GQ495M9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
USH1GQ495M9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC22.28■■□□□ 1.16
USH1GQ495M9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
USH1GQ495M9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
USH1GQ495M9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
USH1GQ495M9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
USH1GQ495M9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
USH1GQ495M9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
USH1GQ495M9 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC22.27■■□□□ 1.16
USH1GQ495M9 FAM207BP-201ENST00000447172 505 ntBASIC22.27■■□□□ 1.16
USH1GQ495M9 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC22.27■■□□□ 1.16
USH1GQ495M9 AP000692.2-201ENST00000608391 879 ntBASIC22.27■■□□□ 1.16
USH1GQ495M9 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
USH1GQ495M9 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
USH1GQ495M9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.27■■□□□ 1.16
USH1GQ495M9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
USH1GQ495M9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
USH1GQ495M9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
USH1GQ495M9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
USH1GQ495M9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
USH1GQ495M9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC22.26■■□□□ 1.15
USH1GQ495M9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC22.26■■□□□ 1.15
USH1GQ495M9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
USH1GQ495M9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
USH1GQ495M9 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
USH1GQ495M9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
USH1GQ495M9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC22.26■■□□□ 1.15
USH1GQ495M9 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC22.26■■□□□ 1.15
USH1GQ495M9 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC22.26■■□□□ 1.15
USH1GQ495M9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC22.26■■□□□ 1.15
USH1GQ495M9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
USH1GQ495M9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
USH1GQ495M9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
USH1GQ495M9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC22.26■■□□□ 1.15
USH1GQ495M9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
USH1GQ495M9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
USH1GQ495M9 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC22.26■■□□□ 1.15
USH1GQ495M9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
USH1GQ495M9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC22.25■■□□□ 1.15
USH1GQ495M9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC22.25■■□□□ 1.15
USH1GQ495M9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC22.25■■□□□ 1.15
USH1GQ495M9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
USH1GQ495M9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
USH1GQ495M9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
USH1GQ495M9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC22.25■■□□□ 1.15
USH1GQ495M9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
USH1GQ495M9 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
USH1GQ495M9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
USH1GQ495M9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
USH1GQ495M9 RCN1P1-201ENST00000400413 996 ntBASIC22.25■■□□□ 1.15
USH1GQ495M9 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC22.25■■□□□ 1.15
USH1GQ495M9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC22.25■■□□□ 1.15
USH1GQ495M9 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC22.25■■□□□ 1.15
USH1GQ495M9 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC22.25■■□□□ 1.15
USH1GQ495M9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC22.25■■□□□ 1.15
USH1GQ495M9 AP005242.2-201ENST00000580065 1175 ntBASIC22.25■■□□□ 1.15
USH1GQ495M9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
USH1GQ495M9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
USH1GQ495M9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
USH1GQ495M9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
USH1GQ495M9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
USH1GQ495M9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
USH1GQ495M9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
USH1GQ495M9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC22.25■■□□□ 1.15
USH1GQ495M9 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
USH1GQ495M9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
USH1GQ495M9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
USH1GQ495M9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.24■■□□□ 1.15
USH1GQ495M9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
USH1GQ495M9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
USH1GQ495M9 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC22.24■■□□□ 1.15
USH1GQ495M9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC22.24■■□□□ 1.15
USH1GQ495M9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC22.24■■□□□ 1.15
USH1GQ495M9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
USH1GQ495M9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
USH1GQ495M9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
USH1GQ495M9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
USH1GQ495M9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
USH1GQ495M9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
USH1GQ495M9 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms