Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.83■□□□□ 0.6
RSPO4Q2I0M5 FBXW4P1-201ENST00000426721 2239 ntBASIC18.82■□□□□ 0.6
RSPO4Q2I0M5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RSPO4Q2I0M5 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RSPO4Q2I0M5 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RSPO4Q2I0M5 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RSPO4Q2I0M5 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RSPO4Q2I0M5 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RSPO4Q2I0M5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
RSPO4Q2I0M5 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.82■□□□□ 0.6
RSPO4Q2I0M5 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RSPO4Q2I0M5 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.82■□□□□ 0.6
RSPO4Q2I0M5 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RSPO4Q2I0M5 AP000867.3-201ENST00000524675 377 ntBASIC18.82■□□□□ 0.6
RSPO4Q2I0M5 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RSPO4Q2I0M5 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RSPO4Q2I0M5 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.82■□□□□ 0.6
RSPO4Q2I0M5 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RSPO4Q2I0M5 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RSPO4Q2I0M5 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RSPO4Q2I0M5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.82■□□□□ 0.6
RSPO4Q2I0M5 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RSPO4Q2I0M5 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RSPO4Q2I0M5 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RSPO4Q2I0M5 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.81■□□□□ 0.6
RSPO4Q2I0M5 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
RSPO4Q2I0M5 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
RSPO4Q2I0M5 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.81■□□□□ 0.6
RSPO4Q2I0M5 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RSPO4Q2I0M5 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RSPO4Q2I0M5 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.81■□□□□ 0.6
RSPO4Q2I0M5 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.81■□□□□ 0.6
RSPO4Q2I0M5 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.81■□□□□ 0.6
RSPO4Q2I0M5 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.81■□□□□ 0.6
RSPO4Q2I0M5 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RSPO4Q2I0M5 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RSPO4Q2I0M5 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RSPO4Q2I0M5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.81■□□□□ 0.6
RSPO4Q2I0M5 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RSPO4Q2I0M5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.81■□□□□ 0.6
RSPO4Q2I0M5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RSPO4Q2I0M5 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RSPO4Q2I0M5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.8■□□□□ 0.6
RSPO4Q2I0M5 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RSPO4Q2I0M5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RSPO4Q2I0M5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RSPO4Q2I0M5 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RSPO4Q2I0M5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.8■□□□□ 0.6
RSPO4Q2I0M5 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RSPO4Q2I0M5 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RSPO4Q2I0M5 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RSPO4Q2I0M5 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.8■□□□□ 0.6
RSPO4Q2I0M5 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.8■□□□□ 0.6
RSPO4Q2I0M5 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.8■□□□□ 0.6
RSPO4Q2I0M5 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.8■□□□□ 0.6
RSPO4Q2I0M5 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.8■□□□□ 0.6
RSPO4Q2I0M5 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RSPO4Q2I0M5 AL355385.1-201ENST00000606123 409 ntBASIC18.8■□□□□ 0.6
RSPO4Q2I0M5 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.8■□□□□ 0.6
RSPO4Q2I0M5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RSPO4Q2I0M5 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.8■□□□□ 0.6
RSPO4Q2I0M5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RSPO4Q2I0M5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RSPO4Q2I0M5 AC007375.3-201ENST00000600936 2314 ntBASIC18.79■□□□□ 0.6
RSPO4Q2I0M5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RSPO4Q2I0M5 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RSPO4Q2I0M5 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RSPO4Q2I0M5 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.79■□□□□ 0.6
RSPO4Q2I0M5 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RSPO4Q2I0M5 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RSPO4Q2I0M5 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.79■□□□□ 0.6
RSPO4Q2I0M5 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RSPO4Q2I0M5 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RSPO4Q2I0M5 TSPY12P-201ENST00000421279 868 ntBASIC18.79■□□□□ 0.6
RSPO4Q2I0M5 CHCHD2P8-201ENST00000429873 447 ntBASIC18.79■□□□□ 0.6
RSPO4Q2I0M5 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RSPO4Q2I0M5 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.79■□□□□ 0.6
RSPO4Q2I0M5 KRT8P26-201ENST00000534154 1276 ntBASIC18.79■□□□□ 0.6
RSPO4Q2I0M5 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.79■□□□□ 0.6
RSPO4Q2I0M5 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.79■□□□□ 0.6
RSPO4Q2I0M5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RSPO4Q2I0M5 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RSPO4Q2I0M5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RSPO4Q2I0M5 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RSPO4Q2I0M5 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RSPO4Q2I0M5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RSPO4Q2I0M5 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RSPO4Q2I0M5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.79■□□□□ 0.6
RSPO4Q2I0M5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RSPO4Q2I0M5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.78■□□□□ 0.6
RSPO4Q2I0M5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RSPO4Q2I0M5 AC018553.1-201ENST00000616682 1458 ntBASIC18.78■□□□□ 0.6
RSPO4Q2I0M5 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RSPO4Q2I0M5 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RSPO4Q2I0M5 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RSPO4Q2I0M5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.78■□□□□ 0.6
RSPO4Q2I0M5 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RSPO4Q2I0M5 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.78■□□□□ 0.6
RSPO4Q2I0M5 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RSPO4Q2I0M5 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms