Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC12.06□□□□□ -0.48
HSPG2P98160 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HSPG2P98160 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HSPG2P98160 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
HSPG2P98160 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
HSPG2P98160 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.06□□□□□ -0.48
HSPG2P98160 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HSPG2P98160 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
HSPG2P98160 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC12.06□□□□□ -0.48
HSPG2P98160 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC12.06□□□□□ -0.48
HSPG2P98160 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC12.05□□□□□ -0.48
HSPG2P98160 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HSPG2P98160 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
HSPG2P98160 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HSPG2P98160 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.05□□□□□ -0.48
HSPG2P98160 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC12.05□□□□□ -0.48
HSPG2P98160 AF238378.1-201ENST00000526806 358 ntBASIC12.05□□□□□ -0.48
HSPG2P98160 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HSPG2P98160 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HSPG2P98160 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HSPG2P98160 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HSPG2P98160 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HSPG2P98160 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HSPG2P98160 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.05□□□□□ -0.48
HSPG2P98160 DRAXINP1-201ENST00000437611 948 ntBASIC12.05□□□□□ -0.48
HSPG2P98160 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.05□□□□□ -0.48
HSPG2P98160 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC12.05□□□□□ -0.48
HSPG2P98160 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
HSPG2P98160 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HSPG2P98160 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
HSPG2P98160 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HSPG2P98160 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HSPG2P98160 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HSPG2P98160 GLRB-205ENST00000512619 728 ntTSL 3 BASIC12.05□□□□□ -0.48
HSPG2P98160 CIB2-208ENST00000560618 804 ntTSL 2 BASIC12.05□□□□□ -0.48
HSPG2P98160 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
HSPG2P98160 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC12.05□□□□□ -0.48
HSPG2P98160 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
HSPG2P98160 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC12.05□□□□□ -0.48
HSPG2P98160 KRT18P58-201ENST00000527480 1120 ntBASIC12.04□□□□□ -0.48
HSPG2P98160 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.04□□□□□ -0.48
HSPG2P98160 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.04□□□□□ -0.48
HSPG2P98160 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.04□□□□□ -0.48
HSPG2P98160 AC112497.1-201ENST00000624824 639 ntBASIC12.04□□□□□ -0.48
HSPG2P98160 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HSPG2P98160 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
HSPG2P98160 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HSPG2P98160 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
HSPG2P98160 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HSPG2P98160 AC012615.1-201ENST00000565797 1299 ntBASIC12.04□□□□□ -0.48
HSPG2P98160 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HSPG2P98160 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HSPG2P98160 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC12.04□□□□□ -0.48
HSPG2P98160 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
HSPG2P98160 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HSPG2P98160 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HSPG2P98160 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HSPG2P98160 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
HSPG2P98160 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC12.04□□□□□ -0.48
HSPG2P98160 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC12.04□□□□□ -0.48
HSPG2P98160 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC12.04□□□□□ -0.48
HSPG2P98160 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC12.04□□□□□ -0.48
HSPG2P98160 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC12.04□□□□□ -0.48
HSPG2P98160 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HSPG2P98160 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HSPG2P98160 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HSPG2P98160 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HSPG2P98160 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
HSPG2P98160 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
HSPG2P98160 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.04□□□□□ -0.48
HSPG2P98160 AC005104.2-201ENST00000427818 678 ntBASIC12.04□□□□□ -0.48
HSPG2P98160 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HSPG2P98160 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.04□□□□□ -0.48
HSPG2P98160 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC12.04□□□□□ -0.48
HSPG2P98160 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.04□□□□□ -0.48
HSPG2P98160 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.04□□□□□ -0.48
HSPG2P98160 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HSPG2P98160 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.03□□□□□ -0.48
HSPG2P98160 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HSPG2P98160 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC12.03□□□□□ -0.48
HSPG2P98160 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HSPG2P98160 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.03□□□□□ -0.48
HSPG2P98160 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC12.03□□□□□ -0.48
HSPG2P98160 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC12.03□□□□□ -0.48
HSPG2P98160 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
HSPG2P98160 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HSPG2P98160 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
HSPG2P98160 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HSPG2P98160 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HSPG2P98160 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HSPG2P98160 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.03□□□□□ -0.48
HSPG2P98160 AC140113.2-201ENST00000604370 208 ntBASIC12.03□□□□□ -0.48
HSPG2P98160 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HSPG2P98160 TMEM179-206ENST00000616017 1645 ntBASIC12.03□□□□□ -0.48
HSPG2P98160 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HSPG2P98160 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.03□□□□□ -0.48
HSPG2P98160 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
HSPG2P98160 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HSPG2P98160 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC12.03□□□□□ -0.48
HSPG2P98160 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms