Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.06■□□□□ 0.32
UBE2NP61088 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2NP61088 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2NP61088 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2NP61088 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2NP61088 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.06■□□□□ 0.32
UBE2NP61088 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
UBE2NP61088 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2NP61088 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
UBE2NP61088 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2NP61088 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2NP61088 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2NP61088 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2NP61088 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.05■□□□□ 0.32
UBE2NP61088 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2NP61088 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2NP61088 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2NP61088 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2NP61088 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
UBE2NP61088 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2NP61088 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2NP61088 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2NP61088 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.05■□□□□ 0.32
UBE2NP61088 Z99916.2-201ENST00000604037 246 ntBASIC17.05■□□□□ 0.32
UBE2NP61088 AC073195.1-201ENST00000607241 877 ntBASIC17.05■□□□□ 0.32
UBE2NP61088 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
UBE2NP61088 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.05■□□□□ 0.32
UBE2NP61088 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
UBE2NP61088 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2NP61088 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBE2NP61088 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2NP61088 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2NP61088 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2NP61088 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2NP61088 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE2NP61088 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2NP61088 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2NP61088 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2NP61088 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE2NP61088 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2NP61088 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE2NP61088 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.04■□□□□ 0.32
UBE2NP61088 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
UBE2NP61088 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
UBE2NP61088 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2NP61088 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.04■□□□□ 0.32
UBE2NP61088 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE2NP61088 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
UBE2NP61088 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2NP61088 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
UBE2NP61088 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE2NP61088 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE2NP61088 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.04■□□□□ 0.32
UBE2NP61088 AL049637.2-201ENST00000641778 930 ntBASIC17.04■□□□□ 0.32
UBE2NP61088 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2NP61088 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2NP61088 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
UBE2NP61088 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2NP61088 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2NP61088 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2NP61088 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2NP61088 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE2NP61088 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
UBE2NP61088 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2NP61088 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.04■□□□□ 0.32
UBE2NP61088 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
UBE2NP61088 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.04■□□□□ 0.32
UBE2NP61088 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2NP61088 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2NP61088 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2NP61088 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBE2NP61088 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2NP61088 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2NP61088 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
UBE2NP61088 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2NP61088 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2NP61088 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2NP61088 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2NP61088 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
UBE2NP61088 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.03■□□□□ 0.32
UBE2NP61088 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
UBE2NP61088 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
UBE2NP61088 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.03■□□□□ 0.32
UBE2NP61088 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2NP61088 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2NP61088 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2NP61088 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
UBE2NP61088 NIFKP9-201ENST00000419265 221 ntBASIC17.03■□□□□ 0.32
UBE2NP61088 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2NP61088 KSR1P1-201ENST00000446298 240 ntBASIC17.03■□□□□ 0.32
UBE2NP61088 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
UBE2NP61088 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.03■□□□□ 0.32
UBE2NP61088 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.03■□□□□ 0.32
UBE2NP61088 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.03■□□□□ 0.32
UBE2NP61088 AL353708.3-201ENST00000610272 989 ntBASIC17.03■□□□□ 0.32
UBE2NP61088 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.03■□□□□ 0.32
UBE2NP61088 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.03■□□□□ 0.32
UBE2NP61088 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2NP61088 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBE2NP61088 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms