Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SPCS3P61009 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.74■□□□□ 0.11
SPCS3P61009 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.74■□□□□ 0.11
SPCS3P61009 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SPCS3P61009 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
SPCS3P61009 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.74■□□□□ 0.11
SPCS3P61009 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SPCS3P61009 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPCS3P61009 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
SPCS3P61009 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.73■□□□□ 0.11
SPCS3P61009 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.73■□□□□ 0.11
SPCS3P61009 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC15.73■□□□□ 0.11
SPCS3P61009 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC15.73■□□□□ 0.11
SPCS3P61009 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPCS3P61009 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.73■□□□□ 0.11
SPCS3P61009 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPCS3P61009 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPCS3P61009 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPCS3P61009 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPCS3P61009 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SPCS3P61009 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SPCS3P61009 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPCS3P61009 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC15.73■□□□□ 0.11
SPCS3P61009 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.73■□□□□ 0.11
SPCS3P61009 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SPCS3P61009 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC15.73■□□□□ 0.11
SPCS3P61009 AC008694.1-202ENST00000636953 945 ntBASIC15.73■□□□□ 0.11
SPCS3P61009 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
SPCS3P61009 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.73■□□□□ 0.11
SPCS3P61009 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPCS3P61009 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.73■□□□□ 0.11
SPCS3P61009 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPCS3P61009 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPCS3P61009 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPCS3P61009 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPCS3P61009 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.73■□□□□ 0.11
SPCS3P61009 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS3P61009 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS3P61009 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS3P61009 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS3P61009 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.72■□□□□ 0.11
SPCS3P61009 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS3P61009 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS3P61009 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
SPCS3P61009 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS3P61009 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS3P61009 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.72■□□□□ 0.11
SPCS3P61009 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS3P61009 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.72■□□□□ 0.11
SPCS3P61009 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS3P61009 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.72■□□□□ 0.11
SPCS3P61009 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS3P61009 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS3P61009 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS3P61009 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.72■□□□□ 0.11
SPCS3P61009 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC15.72■□□□□ 0.11
SPCS3P61009 HES2-205ENST00000487437 968 ntTSL 3 BASIC15.72■□□□□ 0.11
SPCS3P61009 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS3P61009 C2orf69P4-201ENST00000565394 541 ntBASIC15.72■□□□□ 0.11
SPCS3P61009 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS3P61009 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC15.72■□□□□ 0.11
SPCS3P61009 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS3P61009 AL589743.5-201ENST00000616611 1050 ntBASIC15.72■□□□□ 0.11
SPCS3P61009 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS3P61009 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS3P61009 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS3P61009 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS3P61009 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS3P61009 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.72■□□□□ 0.11
SPCS3P61009 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.72■□□□□ 0.11
SPCS3P61009 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS3P61009 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
SPCS3P61009 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.72■□□□□ 0.11
SPCS3P61009 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SPCS3P61009 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
SPCS3P61009 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.71■□□□□ 0.11
SPCS3P61009 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.71■□□□□ 0.11
SPCS3P61009 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.71■□□□□ 0.11
SPCS3P61009 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
SPCS3P61009 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPCS3P61009 AC020763.4-201ENST00000623414 4170 ntBASIC15.71■□□□□ 0.11
SPCS3P61009 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPCS3P61009 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPCS3P61009 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SPCS3P61009 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SPCS3P61009 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPCS3P61009 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPCS3P61009 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPCS3P61009 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.71■□□□□ 0.11
SPCS3P61009 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPCS3P61009 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SPCS3P61009 HSCB-202ENST00000398941 955 ntTSL 2 BASIC15.71■□□□□ 0.11
SPCS3P61009 CNN2P6-201ENST00000439038 900 ntBASIC15.71■□□□□ 0.11
SPCS3P61009 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SPCS3P61009 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC15.71■□□□□ 0.11
SPCS3P61009 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC15.71■□□□□ 0.11
SPCS3P61009 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC15.71■□□□□ 0.11
SPCS3P61009 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPCS3P61009 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
SPCS3P61009 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms