Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SEC61BP60468 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SEC61BP60468 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC10.42□□□□□ -0.74
SEC61BP60468 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SEC61BP60468 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SEC61BP60468 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SEC61BP60468 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
SEC61BP60468 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
SEC61BP60468 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SEC61BP60468 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SEC61BP60468 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SEC61BP60468 AC090340.1-201ENST00000620778 4980 ntBASIC10.41□□□□□ -0.74
SEC61BP60468 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SEC61BP60468 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC10.41□□□□□ -0.74
SEC61BP60468 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
SEC61BP60468 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SEC61BP60468 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SEC61BP60468 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SEC61BP60468 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
SEC61BP60468 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
SEC61BP60468 COPE-203ENST00000351079 907 ntTSL 2 BASIC10.41□□□□□ -0.74
SEC61BP60468 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SEC61BP60468 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SEC61BP60468 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC10.41□□□□□ -0.74
SEC61BP60468 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC10.41□□□□□ -0.74
SEC61BP60468 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC10.41□□□□□ -0.74
SEC61BP60468 GXYLT1P6-201ENST00000456472 1187 ntBASIC10.41□□□□□ -0.74
SEC61BP60468 CA15P1-201ENST00000481698 905 ntBASIC10.41□□□□□ -0.74
SEC61BP60468 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
SEC61BP60468 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC10.41□□□□□ -0.74
SEC61BP60468 GLRB-205ENST00000512619 728 ntTSL 3 BASIC10.41□□□□□ -0.74
SEC61BP60468 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SEC61BP60468 AC010203.1-204ENST00000548782 407 ntBASIC10.41□□□□□ -0.74
SEC61BP60468 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC10.41□□□□□ -0.74
SEC61BP60468 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC10.41□□□□□ -0.74
SEC61BP60468 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC10.41□□□□□ -0.74
SEC61BP60468 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SEC61BP60468 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC10.41□□□□□ -0.74
SEC61BP60468 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
SEC61BP60468 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SEC61BP60468 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
SEC61BP60468 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
SEC61BP60468 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
SEC61BP60468 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SEC61BP60468 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SEC61BP60468 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
SEC61BP60468 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SEC61BP60468 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SEC61BP60468 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SEC61BP60468 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SEC61BP60468 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SEC61BP60468 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SEC61BP60468 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SEC61BP60468 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
SEC61BP60468 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC10.41□□□□□ -0.74
SEC61BP60468 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SEC61BP60468 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SEC61BP60468 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SEC61BP60468 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SEC61BP60468 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SEC61BP60468 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SEC61BP60468 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
SEC61BP60468 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SEC61BP60468 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SEC61BP60468 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SEC61BP60468 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
SEC61BP60468 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
SEC61BP60468 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC10.4□□□□□ -0.74
SEC61BP60468 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
SEC61BP60468 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SEC61BP60468 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
SEC61BP60468 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SEC61BP60468 RNF152P1-201ENST00000397754 604 ntBASIC10.4□□□□□ -0.74
SEC61BP60468 AP000523.1-201ENST00000398242 1049 ntBASIC10.4□□□□□ -0.74
SEC61BP60468 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
SEC61BP60468 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC10.4□□□□□ -0.74
SEC61BP60468 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC10.4□□□□□ -0.74
SEC61BP60468 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC10.4□□□□□ -0.74
SEC61BP60468 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC10.4□□□□□ -0.74
SEC61BP60468 AC104076.2-201ENST00000448912 469 ntBASIC10.4□□□□□ -0.74
SEC61BP60468 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SEC61BP60468 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC10.4□□□□□ -0.74
SEC61BP60468 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
SEC61BP60468 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC10.4□□□□□ -0.74
SEC61BP60468 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC10.4□□□□□ -0.74
SEC61BP60468 AC091076.1-201ENST00000610741 619 ntBASIC10.4□□□□□ -0.74
SEC61BP60468 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
SEC61BP60468 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
SEC61BP60468 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SEC61BP60468 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC10.4□□□□□ -0.74
SEC61BP60468 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
SEC61BP60468 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SEC61BP60468 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC10.4□□□□□ -0.74
SEC61BP60468 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
SEC61BP60468 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC10.4□□□□□ -0.74
SEC61BP60468 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SEC61BP60468 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
SEC61BP60468 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SEC61BP60468 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.75
SEC61BP60468 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms