Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EIF3EP60228 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20■□□□□ 0.79
EIF3EP60228 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20■□□□□ 0.79
EIF3EP60228 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20■□□□□ 0.79
EIF3EP60228 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20■□□□□ 0.79
EIF3EP60228 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20■□□□□ 0.79
EIF3EP60228 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
EIF3EP60228 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EIF3EP60228 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
EIF3EP60228 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.99■□□□□ 0.79
EIF3EP60228 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
EIF3EP60228 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
EIF3EP60228 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.99■□□□□ 0.79
EIF3EP60228 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
EIF3EP60228 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.99■□□□□ 0.79
EIF3EP60228 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.99■□□□□ 0.79
EIF3EP60228 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
EIF3EP60228 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.99■□□□□ 0.79
EIF3EP60228 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.99■□□□□ 0.79
EIF3EP60228 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.99■□□□□ 0.79
EIF3EP60228 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
EIF3EP60228 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.99■□□□□ 0.79
EIF3EP60228 KRT8P8-201ENST00000434750 1448 ntBASIC19.99■□□□□ 0.79
EIF3EP60228 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.99■□□□□ 0.79
EIF3EP60228 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EIF3EP60228 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EIF3EP60228 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EIF3EP60228 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EIF3EP60228 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EIF3EP60228 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
EIF3EP60228 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
EIF3EP60228 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EIF3EP60228 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.98■□□□□ 0.79
EIF3EP60228 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EIF3EP60228 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.98■□□□□ 0.79
EIF3EP60228 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.98■□□□□ 0.79
EIF3EP60228 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.98■□□□□ 0.79
EIF3EP60228 AL121829.2-201ENST00000620908 328 ntBASIC19.98■□□□□ 0.79
EIF3EP60228 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EIF3EP60228 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.98■□□□□ 0.79
EIF3EP60228 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EIF3EP60228 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
EIF3EP60228 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EIF3EP60228 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
EIF3EP60228 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.98■□□□□ 0.79
EIF3EP60228 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
EIF3EP60228 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EIF3EP60228 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
EIF3EP60228 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
EIF3EP60228 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EIF3EP60228 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EIF3EP60228 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EIF3EP60228 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.98■□□□□ 0.79
EIF3EP60228 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.97■□□□□ 0.79
EIF3EP60228 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.97■□□□□ 0.79
EIF3EP60228 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.97■□□□□ 0.79
EIF3EP60228 AC141586.3-201ENST00000562166 1838 ntBASIC19.97■□□□□ 0.79
EIF3EP60228 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
EIF3EP60228 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
EIF3EP60228 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.97■□□□□ 0.79
EIF3EP60228 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
EIF3EP60228 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.97■□□□□ 0.79
EIF3EP60228 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
EIF3EP60228 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
EIF3EP60228 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
EIF3EP60228 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.97■□□□□ 0.79
EIF3EP60228 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
EIF3EP60228 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
EIF3EP60228 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.97■□□□□ 0.79
EIF3EP60228 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
EIF3EP60228 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.97■□□□□ 0.79
EIF3EP60228 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
EIF3EP60228 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
EIF3EP60228 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
EIF3EP60228 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
EIF3EP60228 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
EIF3EP60228 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
EIF3EP60228 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
EIF3EP60228 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
EIF3EP60228 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.97■□□□□ 0.79
EIF3EP60228 AL161938.1-201ENST00000569833 2180 ntBASIC19.97■□□□□ 0.79
EIF3EP60228 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
EIF3EP60228 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
EIF3EP60228 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
EIF3EP60228 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
EIF3EP60228 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
EIF3EP60228 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
EIF3EP60228 AC104417.2-201ENST00000562989 1793 ntBASIC19.96■□□□□ 0.79
EIF3EP60228 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
EIF3EP60228 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.96■□□□□ 0.79
EIF3EP60228 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.96■□□□□ 0.79
EIF3EP60228 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
EIF3EP60228 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
EIF3EP60228 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
EIF3EP60228 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
EIF3EP60228 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
EIF3EP60228 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
EIF3EP60228 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.96■□□□□ 0.79
EIF3EP60228 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.96■□□□□ 0.79
EIF3EP60228 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms