Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH12P55289 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CDH12P55289 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH12P55289 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH12P55289 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH12P55289 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH12P55289 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CDH12P55289 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH12P55289 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH12P55289 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.04■□□□□ 0.48
CDH12P55289 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH12P55289 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.04■□□□□ 0.48
CDH12P55289 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
CDH12P55289 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.04■□□□□ 0.48
CDH12P55289 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDH12P55289 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH12P55289 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH12P55289 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH12P55289 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDH12P55289 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
CDH12P55289 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CDH12P55289 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH12P55289 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDH12P55289 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH12P55289 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
CDH12P55289 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CDH12P55289 AL138781.2-201ENST00000617896 1843 ntBASIC18.03■□□□□ 0.48
CDH12P55289 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.03■□□□□ 0.48
CDH12P55289 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH12P55289 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH12P55289 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH12P55289 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.03■□□□□ 0.48
CDH12P55289 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.03■□□□□ 0.48
CDH12P55289 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.03■□□□□ 0.48
CDH12P55289 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH12P55289 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH12P55289 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.03■□□□□ 0.48
CDH12P55289 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.03■□□□□ 0.48
CDH12P55289 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.03■□□□□ 0.48
CDH12P55289 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.03■□□□□ 0.48
CDH12P55289 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.03■□□□□ 0.48
CDH12P55289 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.03■□□□□ 0.48
CDH12P55289 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH12P55289 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH12P55289 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.03■□□□□ 0.48
CDH12P55289 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH12P55289 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH12P55289 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH12P55289 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH12P55289 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.02■□□□□ 0.48
CDH12P55289 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.02■□□□□ 0.48
CDH12P55289 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH12P55289 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH12P55289 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH12P55289 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CDH12P55289 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDH12P55289 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH12P55289 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH12P55289 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH12P55289 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDH12P55289 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDH12P55289 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CDH12P55289 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH12P55289 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH12P55289 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
CDH12P55289 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.02■□□□□ 0.48
CDH12P55289 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.02■□□□□ 0.48
CDH12P55289 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDH12P55289 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CDH12P55289 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH12P55289 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CDH12P55289 AL161938.1-201ENST00000569833 2180 ntBASIC18.02■□□□□ 0.48
CDH12P55289 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDH12P55289 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CDH12P55289 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDH12P55289 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
CDH12P55289 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDH12P55289 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH12P55289 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH12P55289 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH12P55289 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH12P55289 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH12P55289 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.01■□□□□ 0.47
CDH12P55289 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CDH12P55289 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH12P55289 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CDH12P55289 MIPEPP3-201ENST00000412105 444 ntBASIC18.01■□□□□ 0.47
CDH12P55289 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CDH12P55289 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH12P55289 CROCCP3-202ENST00000420820 1947 ntBASIC18.01■□□□□ 0.47
CDH12P55289 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH12P55289 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CDH12P55289 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CDH12P55289 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH12P55289 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH12P55289 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH12P55289 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH12P55289 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH12P55289 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH12P55289 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms