Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HADHBP55084 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HADHBP55084 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HADHBP55084 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.32■□□□□ 0.84
HADHBP55084 AC083880.1-201ENST00000608266 535 ntBASIC20.32■□□□□ 0.84
HADHBP55084 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.32■□□□□ 0.84
HADHBP55084 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HADHBP55084 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HADHBP55084 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HADHBP55084 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.32■□□□□ 0.84
HADHBP55084 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HADHBP55084 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HADHBP55084 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HADHBP55084 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HADHBP55084 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HADHBP55084 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.31■□□□□ 0.84
HADHBP55084 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.31■□□□□ 0.84
HADHBP55084 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.31■□□□□ 0.84
HADHBP55084 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HADHBP55084 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HADHBP55084 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.31■□□□□ 0.84
HADHBP55084 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HADHBP55084 TUBB8P6-201ENST00000436895 1288 ntBASIC20.31■□□□□ 0.84
HADHBP55084 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.31■□□□□ 0.84
HADHBP55084 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.31■□□□□ 0.84
HADHBP55084 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.31■□□□□ 0.84
HADHBP55084 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.31■□□□□ 0.84
HADHBP55084 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.31■□□□□ 0.84
HADHBP55084 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HADHBP55084 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.31■□□□□ 0.84
HADHBP55084 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HADHBP55084 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.31■□□□□ 0.84
HADHBP55084 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HADHBP55084 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HADHBP55084 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HADHBP55084 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HADHBP55084 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HADHBP55084 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HADHBP55084 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HADHBP55084 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HADHBP55084 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
HADHBP55084 FEM1AP3-201ENST00000403722 1741 ntBASIC20.3■□□□□ 0.84
HADHBP55084 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HADHBP55084 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HADHBP55084 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.3■□□□□ 0.84
HADHBP55084 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.3■□□□□ 0.84
HADHBP55084 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.3■□□□□ 0.84
HADHBP55084 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HADHBP55084 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
HADHBP55084 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.3■□□□□ 0.84
HADHBP55084 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HADHBP55084 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.3■□□□□ 0.84
HADHBP55084 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.3■□□□□ 0.84
HADHBP55084 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HADHBP55084 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.3■□□□□ 0.84
HADHBP55084 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.3■□□□□ 0.84
HADHBP55084 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HADHBP55084 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HADHBP55084 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.3■□□□□ 0.84
HADHBP55084 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.3■□□□□ 0.84
HADHBP55084 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
HADHBP55084 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
HADHBP55084 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
HADHBP55084 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HADHBP55084 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HADHBP55084 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HADHBP55084 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HADHBP55084 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.29■□□□□ 0.84
HADHBP55084 Z98044.1-201ENST00000632503 1764 ntBASIC20.29■□□□□ 0.84
HADHBP55084 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HADHBP55084 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HADHBP55084 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HADHBP55084 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HADHBP55084 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.29■□□□□ 0.84
HADHBP55084 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.29■□□□□ 0.84
HADHBP55084 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.29■□□□□ 0.84
HADHBP55084 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.29■□□□□ 0.84
HADHBP55084 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.29■□□□□ 0.84
HADHBP55084 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.29■□□□□ 0.84
HADHBP55084 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.29■□□□□ 0.84
HADHBP55084 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HADHBP55084 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HADHBP55084 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HADHBP55084 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HADHBP55084 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HADHBP55084 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HADHBP55084 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
HADHBP55084 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.28■□□□□ 0.84
HADHBP55084 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
HADHBP55084 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HADHBP55084 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HADHBP55084 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
HADHBP55084 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.28■□□□□ 0.84
HADHBP55084 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HADHBP55084 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HADHBP55084 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HADHBP55084 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HADHBP55084 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
HADHBP55084 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HADHBP55084 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms