Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF140P52738 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF140P52738 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF140P52738 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF140P52738 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF140P52738 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF140P52738 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF140P52738 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF140P52738 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF140P52738 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ZNF140P52738 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.31■□□□□ 0.68
ZNF140P52738 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.31■□□□□ 0.68
ZNF140P52738 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF140P52738 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.31■□□□□ 0.68
ZNF140P52738 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.31■□□□□ 0.68
ZNF140P52738 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.31■□□□□ 0.68
ZNF140P52738 GCSHP5-201ENST00000443090 522 ntBASIC19.31■□□□□ 0.68
ZNF140P52738 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.31■□□□□ 0.68
ZNF140P52738 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.31■□□□□ 0.68
ZNF140P52738 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.31■□□□□ 0.68
ZNF140P52738 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.31■□□□□ 0.68
ZNF140P52738 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.31■□□□□ 0.68
ZNF140P52738 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.31■□□□□ 0.68
ZNF140P52738 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ZNF140P52738 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF140P52738 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF140P52738 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ZNF140P52738 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF140P52738 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.31■□□□□ 0.68
ZNF140P52738 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF140P52738 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.31■□□□□ 0.68
ZNF140P52738 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF140P52738 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF140P52738 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.3■□□□□ 0.68
ZNF140P52738 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF140P52738 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF140P52738 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ZNF140P52738 HTR7P1-201ENST00000538670 1336 ntBASIC19.3■□□□□ 0.68
ZNF140P52738 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.3■□□□□ 0.68
ZNF140P52738 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ZNF140P52738 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF140P52738 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF140P52738 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF140P52738 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF140P52738 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF140P52738 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF140P52738 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.3■□□□□ 0.68
ZNF140P52738 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.3■□□□□ 0.68
ZNF140P52738 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
ZNF140P52738 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF140P52738 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.3■□□□□ 0.68
ZNF140P52738 FAM197Y4-202ENST00000622692 608 ntBASIC19.3■□□□□ 0.68
ZNF140P52738 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.3■□□□□ 0.68
ZNF140P52738 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF140P52738 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF140P52738 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF140P52738 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF140P52738 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF140P52738 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF140P52738 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF140P52738 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ZNF140P52738 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.29■□□□□ 0.68
ZNF140P52738 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF140P52738 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF140P52738 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF140P52738 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF140P52738 NIFKP9-201ENST00000419265 221 ntBASIC19.29■□□□□ 0.68
ZNF140P52738 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF140P52738 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.29■□□□□ 0.68
ZNF140P52738 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.29■□□□□ 0.68
ZNF140P52738 AL353708.3-201ENST00000610272 989 ntBASIC19.29■□□□□ 0.68
ZNF140P52738 AL445675.2-201ENST00000620291 557 ntBASIC19.29■□□□□ 0.68
ZNF140P52738 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF140P52738 AC141586.3-201ENST00000562166 1838 ntBASIC19.29■□□□□ 0.68
ZNF140P52738 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
ZNF140P52738 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
ZNF140P52738 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF140P52738 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF140P52738 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ZNF140P52738 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF140P52738 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF140P52738 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.28■□□□□ 0.68
ZNF140P52738 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
ZNF140P52738 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF140P52738 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF140P52738 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF140P52738 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF140P52738 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ZNF140P52738 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF140P52738 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF140P52738 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF140P52738 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.28■□□□□ 0.68
ZNF140P52738 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF140P52738 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.28■□□□□ 0.68
ZNF140P52738 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF140P52738 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF140P52738 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.28■□□□□ 0.68
ZNF140P52738 AC142381.4-202ENST00000563973 229 ntBASIC19.28■□□□□ 0.68
ZNF140P52738 RARRES2P10-201ENST00000564312 460 ntBASIC19.28■□□□□ 0.68
ZNF140P52738 AL160286.2-201ENST00000567150 934 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms