Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 CROCCP1-201ENST00000426910 5675 ntBASIC17.55■□□□□ 0.4
CENPAP49450 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.55■□□□□ 0.4
CENPAP49450 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPAP49450 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.55■□□□□ 0.4
CENPAP49450 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CENPAP49450 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CENPAP49450 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPAP49450 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.55■□□□□ 0.4
CENPAP49450 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPAP49450 AC093484.2-201ENST00000580996 2166 ntBASIC17.55■□□□□ 0.4
CENPAP49450 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CENPAP49450 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CENPAP49450 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CENPAP49450 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CENPAP49450 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CENPAP49450 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CENPAP49450 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CENPAP49450 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CENPAP49450 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.54■□□□□ 0.4
CENPAP49450 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CENPAP49450 AL390719.1-204ENST00000412397 1219 ntBASIC17.54■□□□□ 0.4
CENPAP49450 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.54■□□□□ 0.4
CENPAP49450 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.54■□□□□ 0.4
CENPAP49450 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.54■□□□□ 0.4
CENPAP49450 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.54■□□□□ 0.4
CENPAP49450 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.54■□□□□ 0.4
CENPAP49450 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.54■□□□□ 0.4
CENPAP49450 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CENPAP49450 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CENPAP49450 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CENPAP49450 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.54■□□□□ 0.4
CENPAP49450 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.54■□□□□ 0.4
CENPAP49450 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CENPAP49450 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CENPAP49450 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CENPAP49450 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CENPAP49450 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.54■□□□□ 0.4
CENPAP49450 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPAP49450 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CENPAP49450 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPAP49450 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPAP49450 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPAP49450 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
CENPAP49450 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.53■□□□□ 0.4
CENPAP49450 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CENPAP49450 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPAP49450 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.53■□□□□ 0.4
CENPAP49450 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CENPAP49450 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPAP49450 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPAP49450 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CENPAP49450 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CENPAP49450 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPAP49450 Z82202.1-201ENST00000623446 1880 ntBASIC17.53■□□□□ 0.4
CENPAP49450 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CENPAP49450 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CENPAP49450 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.53■□□□□ 0.4
CENPAP49450 GPX1P1-201ENST00000388829 606 ntBASIC17.53■□□□□ 0.4
CENPAP49450 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.53■□□□□ 0.4
CENPAP49450 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.53■□□□□ 0.4
CENPAP49450 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.53■□□□□ 0.4
CENPAP49450 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPAP49450 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPAP49450 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPAP49450 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.53■□□□□ 0.4
CENPAP49450 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPAP49450 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPAP49450 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.53■□□□□ 0.4
CENPAP49450 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPAP49450 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.53■□□□□ 0.4
CENPAP49450 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPAP49450 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPAP49450 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CENPAP49450 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.52■□□□□ 0.4
CENPAP49450 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CENPAP49450 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
CENPAP49450 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CENPAP49450 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CENPAP49450 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.52■□□□□ 0.4
CENPAP49450 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.52■□□□□ 0.4
CENPAP49450 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CENPAP49450 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CENPAP49450 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CENPAP49450 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CENPAP49450 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CENPAP49450 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.52■□□□□ 0.39
CENPAP49450 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.52■□□□□ 0.39
CENPAP49450 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.52■□□□□ 0.39
CENPAP49450 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CENPAP49450 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CENPAP49450 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CENPAP49450 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.39
CENPAP49450 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CENPAP49450 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CENPAP49450 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CENPAP49450 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPAP49450 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
CENPAP49450 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.51■□□□□ 0.39
CENPAP49450 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.51■□□□□ 0.39
CENPAP49450 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms