Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6CP48668 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6CP48668 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6CP48668 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT6CP48668 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT6CP48668 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT6CP48668 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT6CP48668 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT6CP48668 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT6CP48668 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT6CP48668 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT6CP48668 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.77■□□□□ 0.6
KRT6CP48668 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.77■□□□□ 0.6
KRT6CP48668 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
KRT6CP48668 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT6CP48668 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT6CP48668 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.77■□□□□ 0.6
KRT6CP48668 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.77■□□□□ 0.6
KRT6CP48668 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT6CP48668 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.77■□□□□ 0.6
KRT6CP48668 LINC01465-201ENST00000408887 1940 ntBASIC18.77■□□□□ 0.6
KRT6CP48668 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT6CP48668 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT6CP48668 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.77■□□□□ 0.6
KRT6CP48668 YBX1P10-201ENST00000444752 975 ntBASIC18.77■□□□□ 0.6
KRT6CP48668 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.77■□□□□ 0.6
KRT6CP48668 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.77■□□□□ 0.6
KRT6CP48668 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.77■□□□□ 0.6
KRT6CP48668 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.77■□□□□ 0.6
KRT6CP48668 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.77■□□□□ 0.6
KRT6CP48668 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
KRT6CP48668 AL109923.1-201ENST00000618799 583 ntBASIC18.77■□□□□ 0.6
KRT6CP48668 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KRT6CP48668 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KRT6CP48668 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
KRT6CP48668 ZNF815P-204ENST00000434898 1737 ntBASIC18.77■□□□□ 0.59
KRT6CP48668 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KRT6CP48668 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.77■□□□□ 0.59
KRT6CP48668 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.77■□□□□ 0.59
KRT6CP48668 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.77■□□□□ 0.59
KRT6CP48668 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.77■□□□□ 0.59
KRT6CP48668 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT6CP48668 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
KRT6CP48668 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.76■□□□□ 0.59
KRT6CP48668 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.76■□□□□ 0.59
KRT6CP48668 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT6CP48668 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
KRT6CP48668 TNXA-203ENST00000507684 2038 ntBASIC18.76■□□□□ 0.59
KRT6CP48668 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT6CP48668 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT6CP48668 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT6CP48668 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KRT6CP48668 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KRT6CP48668 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.76■□□□□ 0.59
KRT6CP48668 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.76■□□□□ 0.59
KRT6CP48668 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.76■□□□□ 0.59
KRT6CP48668 AC133041.1-202ENST00000642053 222 ntBASIC18.76■□□□□ 0.59
KRT6CP48668 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
KRT6CP48668 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
KRT6CP48668 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
KRT6CP48668 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT6CP48668 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.76■□□□□ 0.59
KRT6CP48668 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.76■□□□□ 0.59
KRT6CP48668 AC026471.1-201ENST00000564629 3026 ntBASIC18.76■□□□□ 0.59
KRT6CP48668 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT6CP48668 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT6CP48668 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
KRT6CP48668 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT6CP48668 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KRT6CP48668 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.75■□□□□ 0.59
KRT6CP48668 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KRT6CP48668 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT6CP48668 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT6CP48668 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
KRT6CP48668 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
KRT6CP48668 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.75■□□□□ 0.59
KRT6CP48668 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KRT6CP48668 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.75■□□□□ 0.59
KRT6CP48668 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.75■□□□□ 0.59
KRT6CP48668 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.75■□□□□ 0.59
KRT6CP48668 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.75■□□□□ 0.59
KRT6CP48668 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.75■□□□□ 0.59
KRT6CP48668 AC083880.1-201ENST00000608266 535 ntBASIC18.75■□□□□ 0.59
KRT6CP48668 AC120498.8-201ENST00000614275 531 ntBASIC18.75■□□□□ 0.59
KRT6CP48668 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
KRT6CP48668 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT6CP48668 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT6CP48668 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.75■□□□□ 0.59
KRT6CP48668 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT6CP48668 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT6CP48668 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.74■□□□□ 0.59
KRT6CP48668 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT6CP48668 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT6CP48668 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.74■□□□□ 0.59
KRT6CP48668 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT6CP48668 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KRT6CP48668 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT6CP48668 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.74■□□□□ 0.59
KRT6CP48668 LETM1P2-201ENST00000597330 2178 ntBASIC18.74■□□□□ 0.59
KRT6CP48668 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms