Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
FDFT1P37268 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
FDFT1P37268 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
FDFT1P37268 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
FDFT1P37268 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.76■□□□□ 0.75
FDFT1P37268 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FDFT1P37268 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
FDFT1P37268 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FDFT1P37268 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
FDFT1P37268 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
FDFT1P37268 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FDFT1P37268 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FDFT1P37268 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FDFT1P37268 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FDFT1P37268 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.76■□□□□ 0.75
FDFT1P37268 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
FDFT1P37268 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FDFT1P37268 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
FDFT1P37268 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.76■□□□□ 0.75
FDFT1P37268 KRT18P16-201ENST00000510337 1294 ntBASIC19.76■□□□□ 0.75
FDFT1P37268 AC090192.1-201ENST00000517740 490 ntBASIC19.76■□□□□ 0.75
FDFT1P37268 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.76■□□□□ 0.75
FDFT1P37268 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
FDFT1P37268 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
FDFT1P37268 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
FDFT1P37268 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FDFT1P37268 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
FDFT1P37268 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FDFT1P37268 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FDFT1P37268 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FDFT1P37268 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FDFT1P37268 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FDFT1P37268 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
FDFT1P37268 TEX21P-204ENST00000641479 1693 ntBASIC19.75■□□□□ 0.75
FDFT1P37268 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FDFT1P37268 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FDFT1P37268 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.75■□□□□ 0.75
FDFT1P37268 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.75■□□□□ 0.75
FDFT1P37268 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FDFT1P37268 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.75■□□□□ 0.75
FDFT1P37268 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
FDFT1P37268 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.75■□□□□ 0.75
FDFT1P37268 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.75■□□□□ 0.75
FDFT1P37268 TUBB8P6-201ENST00000436895 1288 ntBASIC19.75■□□□□ 0.75
FDFT1P37268 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
FDFT1P37268 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.75■□□□□ 0.75
FDFT1P37268 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.75■□□□□ 0.75
FDFT1P37268 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.75■□□□□ 0.75
FDFT1P37268 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
FDFT1P37268 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
FDFT1P37268 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.75■□□□□ 0.75
FDFT1P37268 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FDFT1P37268 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FDFT1P37268 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
FDFT1P37268 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FDFT1P37268 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FDFT1P37268 AC104417.2-201ENST00000562989 1793 ntBASIC19.75■□□□□ 0.75
FDFT1P37268 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FDFT1P37268 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.75■□□□□ 0.75
FDFT1P37268 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.75■□□□□ 0.75
FDFT1P37268 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FDFT1P37268 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
FDFT1P37268 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.74■□□□□ 0.75
FDFT1P37268 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FDFT1P37268 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FDFT1P37268 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FDFT1P37268 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FDFT1P37268 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
FDFT1P37268 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.74■□□□□ 0.75
FDFT1P37268 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FDFT1P37268 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.74■□□□□ 0.75
FDFT1P37268 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FDFT1P37268 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.74■□□□□ 0.75
FDFT1P37268 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
FDFT1P37268 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.74■□□□□ 0.75
FDFT1P37268 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.74■□□□□ 0.75
FDFT1P37268 UNC93B4-201ENST00000505679 747 ntBASIC19.74■□□□□ 0.75
FDFT1P37268 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
FDFT1P37268 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.74■□□□□ 0.75
FDFT1P37268 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FDFT1P37268 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.74■□□□□ 0.75
FDFT1P37268 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
FDFT1P37268 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.74■□□□□ 0.75
FDFT1P37268 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.74■□□□□ 0.75
FDFT1P37268 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FDFT1P37268 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FDFT1P37268 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FDFT1P37268 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FDFT1P37268 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.74■□□□□ 0.75
FDFT1P37268 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
FDFT1P37268 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
FDFT1P37268 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FDFT1P37268 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.74■□□□□ 0.75
FDFT1P37268 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FDFT1P37268 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FDFT1P37268 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FDFT1P37268 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FDFT1P37268 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FDFT1P37268 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FDFT1P37268 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms