Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
PDE6BP35913 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.95■■□□□ 1.43
PDE6BP35913 KRT8P11-201ENST00000409686 1436 ntBASIC23.95■■□□□ 1.42
PDE6BP35913 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
PDE6BP35913 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.95■■□□□ 1.42
PDE6BP35913 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PDE6BP35913 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PDE6BP35913 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PDE6BP35913 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC23.95■■□□□ 1.42
PDE6BP35913 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC23.95■■□□□ 1.42
PDE6BP35913 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC23.95■■□□□ 1.42
PDE6BP35913 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC23.95■■□□□ 1.42
PDE6BP35913 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC23.95■■□□□ 1.42
PDE6BP35913 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC23.95■■□□□ 1.42
PDE6BP35913 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC23.95■■□□□ 1.42
PDE6BP35913 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
PDE6BP35913 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
PDE6BP35913 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PDE6BP35913 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PDE6BP35913 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC23.95■■□□□ 1.42
PDE6BP35913 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC23.94■■□□□ 1.42
PDE6BP35913 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC23.94■■□□□ 1.42
PDE6BP35913 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PDE6BP35913 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PDE6BP35913 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PDE6BP35913 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC23.94■■□□□ 1.42
PDE6BP35913 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC23.94■■□□□ 1.42
PDE6BP35913 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PDE6BP35913 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PDE6BP35913 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PDE6BP35913 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.93■■□□□ 1.42
PDE6BP35913 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC23.93■■□□□ 1.42
PDE6BP35913 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PDE6BP35913 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC23.93■■□□□ 1.42
PDE6BP35913 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
PDE6BP35913 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PDE6BP35913 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PDE6BP35913 AC079834.2-201ENST00000609776 1949 ntBASIC23.93■■□□□ 1.42
PDE6BP35913 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PDE6BP35913 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PDE6BP35913 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
PDE6BP35913 SPDYE13P-201ENST00000445314 798 ntBASIC23.93■■□□□ 1.42
PDE6BP35913 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PDE6BP35913 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PDE6BP35913 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.93■■□□□ 1.42
PDE6BP35913 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PDE6BP35913 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PDE6BP35913 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PDE6BP35913 FEM1AP1-201ENST00000431297 1995 ntBASIC23.92■■□□□ 1.42
PDE6BP35913 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PDE6BP35913 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PDE6BP35913 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
PDE6BP35913 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PDE6BP35913 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
PDE6BP35913 GAD2-202ENST00000376248 680 ntTSL 5 BASIC23.92■■□□□ 1.42
PDE6BP35913 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC23.92■■□□□ 1.42
PDE6BP35913 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC23.92■■□□□ 1.42
PDE6BP35913 TSPY21P-201ENST00000433481 731 ntBASIC23.92■■□□□ 1.42
PDE6BP35913 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC23.92■■□□□ 1.42
PDE6BP35913 TSPY23P-201ENST00000440136 739 ntBASIC23.92■■□□□ 1.42
PDE6BP35913 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC23.92■■□□□ 1.42
PDE6BP35913 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.92■■□□□ 1.42
PDE6BP35913 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PDE6BP35913 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PDE6BP35913 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC23.91■■□□□ 1.42
PDE6BP35913 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC23.91■■□□□ 1.42
PDE6BP35913 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDE6BP35913 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.91■■□□□ 1.42
PDE6BP35913 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23.91■■□□□ 1.42
PDE6BP35913 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDE6BP35913 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDE6BP35913 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC23.91■■□□□ 1.42
PDE6BP35913 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDE6BP35913 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDE6BP35913 MIR3652-201ENST00000579335 131 ntBASIC23.91■■□□□ 1.42
PDE6BP35913 PRR29-207ENST00000580752 458 ntTSL 3 BASIC23.91■■□□□ 1.42
PDE6BP35913 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PDE6BP35913 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PDE6BP35913 AC092119.3-201ENST00000612618 583 ntBASIC23.91■■□□□ 1.42
PDE6BP35913 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
PDE6BP35913 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
PDE6BP35913 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC23.91■■□□□ 1.42
PDE6BP35913 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDE6BP35913 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDE6BP35913 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDE6BP35913 HBZP1-201ENST00000354915 429 ntBASIC23.9■■□□□ 1.42
PDE6BP35913 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PDE6BP35913 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC23.9■■□□□ 1.42
PDE6BP35913 SDHD-206ENST00000528182 754 ntTSL 3 BASIC23.9■■□□□ 1.42
PDE6BP35913 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC23.9■■□□□ 1.42
PDE6BP35913 GOLGA2P11-201ENST00000562660 1621 ntBASIC23.9■■□□□ 1.42
PDE6BP35913 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PDE6BP35913 MOK-225ENST00000522867 1883 ntTSL 5 BASIC23.9■■□□□ 1.42
PDE6BP35913 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PDE6BP35913 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PDE6BP35913 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PDE6BP35913 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PDE6BP35913 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PDE6BP35913 BUB3-202ENST00000368859 667 ntTSL 3 BASIC23.89■■□□□ 1.41
PDE6BP35913 AL645929.1-201ENST00000420084 975 ntBASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms