Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.75■□□□□ 0.43
SHC1P29353 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.75■□□□□ 0.43
SHC1P29353 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
SHC1P29353 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SHC1P29353 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHC1P29353 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.75■□□□□ 0.43
SHC1P29353 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SHC1P29353 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SHC1P29353 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.75■□□□□ 0.43
SHC1P29353 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHC1P29353 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHC1P29353 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHC1P29353 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHC1P29353 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHC1P29353 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHC1P29353 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SHC1P29353 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHC1P29353 AC009237.14-201ENST00000609975 1594 ntBASIC17.74■□□□□ 0.43
SHC1P29353 AP001271.2-201ENST00000624018 1556 ntBASIC17.74■□□□□ 0.43
SHC1P29353 AC093484.2-201ENST00000580996 2166 ntBASIC17.74■□□□□ 0.43
SHC1P29353 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.74■□□□□ 0.43
SHC1P29353 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.74■□□□□ 0.43
SHC1P29353 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHC1P29353 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHC1P29353 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SHC1P29353 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.74■□□□□ 0.43
SHC1P29353 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHC1P29353 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHC1P29353 TMEM179-206ENST00000616017 1645 ntBASIC17.74■□□□□ 0.43
SHC1P29353 AC239809.2-201ENST00000415381 517 ntBASIC17.74■□□□□ 0.43
SHC1P29353 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SHC1P29353 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
SHC1P29353 AC124016.1-201ENST00000609552 612 ntBASIC17.74■□□□□ 0.43
SHC1P29353 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SHC1P29353 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
SHC1P29353 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.74■□□□□ 0.43
SHC1P29353 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHC1P29353 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.74■□□□□ 0.43
SHC1P29353 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHC1P29353 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHC1P29353 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.74■□□□□ 0.43
SHC1P29353 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHC1P29353 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHC1P29353 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.74■□□□□ 0.43
SHC1P29353 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHC1P29353 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
SHC1P29353 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHC1P29353 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SHC1P29353 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHC1P29353 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHC1P29353 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.73■□□□□ 0.43
SHC1P29353 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SHC1P29353 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SHC1P29353 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHC1P29353 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.73■□□□□ 0.43
SHC1P29353 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SHC1P29353 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHC1P29353 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.73■□□□□ 0.43
SHC1P29353 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHC1P29353 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.73■□□□□ 0.43
SHC1P29353 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.73■□□□□ 0.43
SHC1P29353 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.73■□□□□ 0.43
SHC1P29353 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SHC1P29353 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.73■□□□□ 0.43
SHC1P29353 RPPH1-201ENST00000516869 333 ntBASIC17.73■□□□□ 0.43
SHC1P29353 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.73■□□□□ 0.43
SHC1P29353 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SHC1P29353 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.73■□□□□ 0.43
SHC1P29353 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHC1P29353 AL359736.2-201ENST00000621992 437 ntBASIC17.73■□□□□ 0.43
SHC1P29353 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SHC1P29353 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SHC1P29353 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SHC1P29353 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHC1P29353 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.73■□□□□ 0.43
SHC1P29353 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SHC1P29353 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.73■□□□□ 0.43
SHC1P29353 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHC1P29353 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.73■□□□□ 0.43
SHC1P29353 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHC1P29353 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.72■□□□□ 0.43
SHC1P29353 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.72■□□□□ 0.43
SHC1P29353 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
SHC1P29353 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHC1P29353 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SHC1P29353 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SHC1P29353 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
SHC1P29353 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHC1P29353 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHC1P29353 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SHC1P29353 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHC1P29353 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.72■□□□□ 0.43
SHC1P29353 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SHC1P29353 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.72■□□□□ 0.43
SHC1P29353 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SHC1P29353 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SHC1P29353 GCSHP5-201ENST00000443090 522 ntBASIC17.72■□□□□ 0.43
SHC1P29353 AL158047.1-201ENST00000445918 881 ntBASIC17.72■□□□□ 0.43
SHC1P29353 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.72■□□□□ 0.43
SHC1P29353 PRKY-204ENST00000533551 1019 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms