Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.39■□□□□ 0.53
PTPN6P29350 POU5F1P3-201ENST00000428824 1078 ntBASIC18.39■□□□□ 0.53
PTPN6P29350 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN6P29350 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN6P29350 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN6P29350 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN6P29350 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.39■□□□□ 0.53
PTPN6P29350 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PTPN6P29350 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPN6P29350 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN6P29350 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN6P29350 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PTPN6P29350 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN6P29350 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN6P29350 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN6P29350 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PTPN6P29350 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN6P29350 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
PTPN6P29350 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN6P29350 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN6P29350 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN6P29350 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.38■□□□□ 0.53
PTPN6P29350 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.38■□□□□ 0.53
PTPN6P29350 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.38■□□□□ 0.53
PTPN6P29350 FAM201B-201ENST00000458407 597 ntBASIC18.38■□□□□ 0.53
PTPN6P29350 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.38■□□□□ 0.53
PTPN6P29350 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PTPN6P29350 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PTPN6P29350 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN6P29350 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN6P29350 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN6P29350 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN6P29350 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN6P29350 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN6P29350 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PTPN6P29350 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN6P29350 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PTPN6P29350 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN6P29350 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTPN6P29350 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.38■□□□□ 0.53
PTPN6P29350 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.38■□□□□ 0.53
PTPN6P29350 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.38■□□□□ 0.53
PTPN6P29350 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN6P29350 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN6P29350 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN6P29350 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.37■□□□□ 0.53
PTPN6P29350 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN6P29350 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PTPN6P29350 ESRRAP1-201ENST00000400596 1257 ntBASIC18.37■□□□□ 0.53
PTPN6P29350 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.37■□□□□ 0.53
PTPN6P29350 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN6P29350 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.37■□□□□ 0.53
PTPN6P29350 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.37■□□□□ 0.53
PTPN6P29350 AC005829.2-201ENST00000571422 1056 ntBASIC18.37■□□□□ 0.53
PTPN6P29350 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN6P29350 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PTPN6P29350 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PTPN6P29350 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.37■□□□□ 0.53
PTPN6P29350 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.37■□□□□ 0.53
PTPN6P29350 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN6P29350 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN6P29350 ZNF815P-204ENST00000434898 1737 ntBASIC18.37■□□□□ 0.53
PTPN6P29350 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN6P29350 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PTPN6P29350 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PTPN6P29350 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.37■□□□□ 0.53
PTPN6P29350 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PTPN6P29350 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN6P29350 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN6P29350 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN6P29350 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN6P29350 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PTPN6P29350 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN6P29350 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN6P29350 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN6P29350 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN6P29350 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PTPN6P29350 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN6P29350 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN6P29350 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN6P29350 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN6P29350 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN6P29350 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN6P29350 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.36■□□□□ 0.53
PTPN6P29350 AP003097.1-201ENST00000530657 1135 ntBASIC18.36■□□□□ 0.53
PTPN6P29350 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN6P29350 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.36■□□□□ 0.53
PTPN6P29350 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN6P29350 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN6P29350 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN6P29350 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN6P29350 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
PTPN6P29350 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN6P29350 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN6P29350 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PTPN6P29350 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PTPN6P29350 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
PTPN6P29350 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN6P29350 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN6P29350 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms