Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LAMA1P25391 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.03■□□□□ 0.64
LAMA1P25391 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LAMA1P25391 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LAMA1P25391 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LAMA1P25391 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LAMA1P25391 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LAMA1P25391 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.03■□□□□ 0.64
LAMA1P25391 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.03■□□□□ 0.64
LAMA1P25391 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LAMA1P25391 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LAMA1P25391 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LAMA1P25391 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LAMA1P25391 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.03■□□□□ 0.64
LAMA1P25391 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.03■□□□□ 0.64
LAMA1P25391 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LAMA1P25391 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.03■□□□□ 0.64
LAMA1P25391 NEK4P2-201ENST00000580004 1012 ntBASIC19.03■□□□□ 0.64
LAMA1P25391 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.03■□□□□ 0.64
LAMA1P25391 AC092119.3-201ENST00000612618 583 ntBASIC19.03■□□□□ 0.64
LAMA1P25391 NPAP1P7-201ENST00000613027 823 ntBASIC19.03■□□□□ 0.64
LAMA1P25391 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LAMA1P25391 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LAMA1P25391 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
LAMA1P25391 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LAMA1P25391 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LAMA1P25391 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
LAMA1P25391 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LAMA1P25391 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.02■□□□□ 0.64
LAMA1P25391 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LAMA1P25391 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LAMA1P25391 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LAMA1P25391 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LAMA1P25391 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LAMA1P25391 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
LAMA1P25391 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.02■□□□□ 0.64
LAMA1P25391 SPDYE15P-201ENST00000424157 909 ntBASIC19.02■□□□□ 0.64
LAMA1P25391 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.02■□□□□ 0.64
LAMA1P25391 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.02■□□□□ 0.64
LAMA1P25391 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.02■□□□□ 0.63
LAMA1P25391 TUBB8P6-201ENST00000436895 1288 ntBASIC19.02■□□□□ 0.63
LAMA1P25391 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.02■□□□□ 0.63
LAMA1P25391 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LAMA1P25391 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
LAMA1P25391 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LAMA1P25391 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LAMA1P25391 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LAMA1P25391 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LAMA1P25391 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
LAMA1P25391 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
LAMA1P25391 AP000523.1-201ENST00000398242 1049 ntBASIC19.01■□□□□ 0.63
LAMA1P25391 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.01■□□□□ 0.63
LAMA1P25391 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LAMA1P25391 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
LAMA1P25391 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LAMA1P25391 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LAMA1P25391 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LAMA1P25391 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.01■□□□□ 0.63
LAMA1P25391 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.01■□□□□ 0.63
LAMA1P25391 AL845331.1-201ENST00000424978 1190 ntBASIC19.01■□□□□ 0.63
LAMA1P25391 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.01■□□□□ 0.63
LAMA1P25391 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.01■□□□□ 0.63
LAMA1P25391 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.01■□□□□ 0.63
LAMA1P25391 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.01■□□□□ 0.63
LAMA1P25391 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
LAMA1P25391 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LAMA1P25391 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LAMA1P25391 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LAMA1P25391 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19■□□□□ 0.63
LAMA1P25391 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LAMA1P25391 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LAMA1P25391 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LAMA1P25391 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19■□□□□ 0.63
LAMA1P25391 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LAMA1P25391 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
LAMA1P25391 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
LAMA1P25391 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LAMA1P25391 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19■□□□□ 0.63
LAMA1P25391 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LAMA1P25391 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19■□□□□ 0.63
LAMA1P25391 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19■□□□□ 0.63
LAMA1P25391 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19■□□□□ 0.63
LAMA1P25391 AC073314.1-201ENST00000568729 2216 ntBASIC19■□□□□ 0.63
LAMA1P25391 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LAMA1P25391 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LAMA1P25391 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19■□□□□ 0.63
LAMA1P25391 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LAMA1P25391 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19■□□□□ 0.63
LAMA1P25391 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19■□□□□ 0.63
LAMA1P25391 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
LAMA1P25391 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LAMA1P25391 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LAMA1P25391 AL732292.2-201ENST00000609649 430 ntBASIC18.99■□□□□ 0.63
LAMA1P25391 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LAMA1P25391 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.99■□□□□ 0.63
LAMA1P25391 AL157384.1-201ENST00000445995 2473 ntBASIC18.99■□□□□ 0.63
LAMA1P25391 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LAMA1P25391 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LAMA1P25391 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LAMA1P25391 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms