Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATF1P18846 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATF1P18846 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATF1P18846 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.01■□□□□ 0.31
ATF1P18846 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATF1P18846 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATF1P18846 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATF1P18846 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.01■□□□□ 0.31
ATF1P18846 AC079598.2-202ENST00000546624 1451 ntBASIC17.01■□□□□ 0.31
ATF1P18846 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.01■□□□□ 0.31
ATF1P18846 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATF1P18846 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATF1P18846 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.01■□□□□ 0.31
ATF1P18846 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
ATF1P18846 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.01■□□□□ 0.31
ATF1P18846 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
ATF1P18846 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.01■□□□□ 0.31
ATF1P18846 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATF1P18846 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATF1P18846 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.01■□□□□ 0.31
ATF1P18846 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATF1P18846 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATF1P18846 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.01■□□□□ 0.31
ATF1P18846 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
ATF1P18846 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.01■□□□□ 0.31
ATF1P18846 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATF1P18846 KRT17P1-201ENST00000399211 1546 ntBASIC17.01■□□□□ 0.31
ATF1P18846 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17■□□□□ 0.31
ATF1P18846 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATF1P18846 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17■□□□□ 0.31
ATF1P18846 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATF1P18846 PHGDH-210ENST00000641115 1638 ntBASIC17■□□□□ 0.31
ATF1P18846 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATF1P18846 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
ATF1P18846 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ATF1P18846 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATF1P18846 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATF1P18846 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
ATF1P18846 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17■□□□□ 0.31
ATF1P18846 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17■□□□□ 0.31
ATF1P18846 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17■□□□□ 0.31
ATF1P18846 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17■□□□□ 0.31
ATF1P18846 MIR5787-201ENST00000611784 55 ntBASIC17■□□□□ 0.31
ATF1P18846 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
ATF1P18846 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17■□□□□ 0.31
ATF1P18846 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
ATF1P18846 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
ATF1P18846 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATF1P18846 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17■□□□□ 0.31
ATF1P18846 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATF1P18846 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATF1P18846 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATF1P18846 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATF1P18846 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
ATF1P18846 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
ATF1P18846 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATF1P18846 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.99■□□□□ 0.31
ATF1P18846 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATF1P18846 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATF1P18846 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATF1P18846 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.99■□□□□ 0.31
ATF1P18846 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATF1P18846 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.99■□□□□ 0.31
ATF1P18846 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
ATF1P18846 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.99■□□□□ 0.31
ATF1P18846 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATF1P18846 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATF1P18846 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
ATF1P18846 AC093787.1-201ENST00000450396 207 ntBASIC16.99■□□□□ 0.31
ATF1P18846 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.99■□□□□ 0.31
ATF1P18846 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.99■□□□□ 0.31
ATF1P18846 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATF1P18846 AC005181.1-201ENST00000604782 1256 ntBASIC16.99■□□□□ 0.31
ATF1P18846 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.99■□□□□ 0.31
ATF1P18846 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.99■□□□□ 0.31
ATF1P18846 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
ATF1P18846 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.99■□□□□ 0.31
ATF1P18846 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATF1P18846 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.99■□□□□ 0.31
ATF1P18846 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.99■□□□□ 0.31
ATF1P18846 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATF1P18846 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATF1P18846 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.99■□□□□ 0.31
ATF1P18846 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATF1P18846 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ATF1P18846 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATF1P18846 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.98■□□□□ 0.31
ATF1P18846 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
ATF1P18846 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATF1P18846 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATF1P18846 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATF1P18846 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATF1P18846 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATF1P18846 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATF1P18846 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATF1P18846 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.98■□□□□ 0.31
ATF1P18846 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.98■□□□□ 0.31
ATF1P18846 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATF1P18846 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATF1P18846 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms